Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0167 ATGAATCTGATGGCAGACAATAATGGAAGTACTGTGCATGAACCGACACATGACAATAAGAAGAACAAATGGAAGTTGCCCCTCCTTGTTTTCTTCAACGATTTAAGAAATGTGTTCAAGATGGATTCGATTGGTCGGGAATTACTGGGAATTGCATTTCCAGCTGCTTTGGCTGTGGCTGCTGATCCCATTGCTTCTCTCATCGACACTGCTTTCATTGGTCACTTGGGACCTTTGGAACTTGCTGCTGCTGGAGTATCTATAACATTGTTCAACCAAGCTTCAAGGATCACCATCTTCCCTCTGGTCAGCATCACAACTTCATTTGTAGCAGAGGAAGATACTCTCAAGAAAATCTCAGGAACTAAACTATCGTCAGAAGATCATCAATCCAACAACGACAACAACAATTGTAATAATAAGAAGCCAACAAAAGAAAGTGTCGTAGATGATGAGGCCAACAACGTTAATGACATTGAAAAAGGTTGTTCCAAACAGAATCATCATCATCATGCTTCTGTAGTGGCAAACTCTTCTTCGTCTGCAAATAATAATAATGTTGAGTTTGAGAATTCTGATGCTTCTATCAAATACGACAAGAATAGTAATAAAAGCAAGAGTAGTTGTAAGAATAATCAGAGCAAGAAGACCAAAAGGAAACAGATAGCTTCAGCATCAACAGCATTAATATTTGGAACAATTCTTGGTCTCATTCAAGCATCAATCCTTATATTTGCTGCAAAACCTCTATTGCTTCTTATGGGTGCCAAACCAGGTTCTCCCATGCTGATTCTTGCGCAAAAGTATTTGAAACTGAGAGCACTGGGTTCTCCTGCTGTCCTTCTAGCTTTGTCTATGCAAGGCATCTTCCGAGGCTTCAAGGACACCACAACTCCCTTATATGTTATTGTTTTCGGGTATTCCATAAATGTGGCGTTGGATCCAATACTCATATTTCACTTGAAGTTAGGCCTCAAAGGGGCAGCCATTTCACATGTCATCTCACAGTACTTGATGGCACTGGCTCTGTTGTTGATATTACTGAGAAGAGTTGATCTGTTACCTCCTAGTCTTAAGGATTTGCAGATTTTCCGGTTCCTTAAAAACGGAGGGTTGTTGATGTTAAAAGTAATAGCAGTAACATTCTGTGTAACATTTGCGGCTTCATTAGCAACAAGGTTGGGTCCCATTTCCATGGCTGCCTTCCAAACCTGTCAACAAGTTTGGATCACTACTTCCCTTCTTGCTGATGGCTTAGCTGTTGCTATTCAGGCAGTTCTAGCATGTTCGTTTGCTGAGAAAGACTATGTGAAGACCAAAGCAGCAGCCACAAGAGTACTTCAAATGACATTTGTAATGGGAGTAGGGCTGTCTCTGGTAGTAGGCATTGGATTGTACTTTGGAGCTGGCGTCTTCTCCACAACCCCCACTGTTCTCCAACTCATCAGAATTGGCCTCCCTTTTGTAGCAGCAACACAACCGATCAATGCATTAGCGTTTGTGTTTGACGGTGTCAACTATGGAGCATCTGATTTTACATATGCAGCCACTTCTTTGGTAATAGTTTCAATTGTGAGCGTTGGAATAGAATATGCCATGTATAAGATGAAAGGCTTCGTTGGCATCTGGATTGGTTTGACTATATATATGGCTCTTCGCATGCTTGCTGGTGTTTGGAGGATGGGAACAGGAACAGGACCTTGGCGTTTCCTTAGACAATGA 1722 0.4164 MNLMADNNGSTVHEPTHDNKKNKWKLPLLVFFNDLRNVFKMDSIGRELLGIAFPAALAVAADPIASLIDTAFIGHLGPLELAAAGVSITLFNQASRITIFPLVSITTSFVAEEDTLKKISGTKLSSEDHQSNNDNNNCNNKKPTKESVVDDEANNVNDIEKGCSKQNHHHHASVVANSSSSANNNNVEFENSDASIKYDKNSNKSKSSCKNNQSKKTKRKQIASASTALIFGTILGLIQASILIFAAKPLLLLMGAKPGSPMLILAQKYLKLRALGSPAVLLALSMQGIFRGFKDTTTPLYVIVFGYSINVALDPILIFHLKLGLKGAAISHVISQYLMALALLLILLRRVDLLPPSLKDLQIFRFLKNGGLLMLKVIAVTFCVTFAASLATRLGPISMAAFQTCQQVWITTSLLADGLAVAIQAVLACSFAEKDYVKTKAAATRVLQMTFVMGVGLSLVVGIGLYFGAGVFSTTPTVLQLIRIGLPFVAATQPINALAFVFDGVNYGASDFTYAATSLVIVSIVSVGIEYAMYKMKGFVGIWIGLTIYMALRMLAGVWRMGTGTGPWRFLRQ 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0167 573 MobiDBLite consensus disorder prediction 170 192 - -
Lele30g0167 573 Pfam MatE 224 316 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele30g0167 573 Pfam MatE 374 531 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele30g0167 573 MobiDBLite consensus disorder prediction 144 167 - -
Lele30g0167 573 MobiDBLite consensus disorder prediction 121 217 - -
Lele30g0167 573 CDD MATE_DinF_like 62 563 IPR044644 -
Lele30g0167 573 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 14 572 IPR044644 -
Lele30g0167 573 TIGRFAM matE: MATE efflux family protein 54 543 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele30g0167 573 MobiDBLite consensus disorder prediction 125 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0167 Lele-ChrLele30 1697127 1702492 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0167 30 1697127 1702492 Lele31g0187 31 1844192 1849026 hybridization
Lele30g0167 30 1697127 1702492 Lele32g1222 32 13185179 13190605 hybridization