Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0163 ATGGCATTGTGTGGCCGAATCAGATCAGGCAGCTCTCTCGTCAACAAATTGACGTATCTTAGTTCCGATACTGTCTCTGCTCGGAGATCCACACTTCATCGATCCCTGATTGCCCCCTTCACTTCCCTGGACTCTAGGAATTATGCCACGGCATCAGGGAACAAGGAGGAAAAAGTAAAGTTGCCACTGGCCTTGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATACGGCAGCAGTAAAAGCTAATGCATTGGAAAAGGTTGAGTCTGAGGTTCTCGACCTTGTTGAGGCAATGAAGAATAGCCCTAAATTTGCTCAGTTTACAAAGGACTTGTCTGTGCCTAAAGATATCAGAATTAAGGCCATCGAGGAAATTTCTAAGGAAGCTAAATTTTCAGTTATTACAAAGAACTTCCTTGTTATTGTGGCTGAGAATGGAAGGCTAAGAAACATAGATACCATAGCAAAGAAGTTTGCACAGTTGACAATGGCACATAAGGGAGAAGTGAAAGCCATTGTGACCACTGTTATTCCTCTTCCCCCTCAAGAAGAGAAGCAACTGAAAGAGACCCTTCAAGAGATCATAGGGGCAGGGAAAAAGGTTCATATTGAACAGAAGATTGATCCTAGCATCCTTGGTGGTCTAGTGGTAGAATTTAACCAGAAGGTCCTAGATGTTTCGATTAAGACTAGGGCTAGCCAGATGGAGCGGTTCCTCCGAGAGCCCATAAACTTCGGTGAAATCTAG 753 0.4409 MALCGRIRSGSSLVNKLTYLSSDTVSARRSTLHRSLIAPFTSLDSRNYATASGNKEEKVKLPLALFGGSGNYASALYTAAVKANALEKVESEVLDLVEAMKNSPKFAQFTKDLSVPKDIRIKAIEEISKEAKFSVITKNFLVIVAENGRLRNIDTIAKKFAQLTMAHKGEVKAIVTTVIPLPPQEEKQLKETLQEIIGAGKKVHIEQKIDPSILGGLVVEFNQKVLDVSIKTRASQMERFLREPINFGEI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0163 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 69 170 IPR026015 -
Lele30g0163 250 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 71 240 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 PANTHER ATP SYNTHASE DELTA CHAIN 43 243 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 Gene3D - 68 161 IPR026015 -
Lele30g0163 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 203 222 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lele30g0163 250 PRINTS ATP synthase delta subunit signature 201 216 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 PRINTS ATP synthase delta subunit signature 149 163 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 PRINTS ATP synthase delta subunit signature 68 87 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 PRINTS ATP synthase delta subunit signature 138 149 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 Hamap ATP synthase subunit delta [atpD]. 64 243 IPR000711 GO:0015986|GO:0046933
Lele30g0163 250 Pfam ATP synthase delta (OSCP) subunit 70 239 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0163 Lele-ChrLele30 1639718 1646282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0163 108 250 Primary Pumps ATPases AT5G13450 66.434 1.92e-67 205