Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0161 ATGGATTACGCTCCTGGAAACGGAACAATGATTGTTGAAGCTACCTCGAACTGCATTCTGTTGAATTCGAAAGCGCTTGACTGTTTCTTTTCAAAATATTGTTTCAATATTAACGATAATAGACCAATGGAGGTACATTACATAGATACGGGCTTTCCTTATCCTGTTACTGAAAGCTTCATGGACTTCTTTGAAGGCATCACGTATGCGCCAGCGAATTGTCTCCACAACGGATCCGTGCCTGATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATACAAATACGACATGTCTGGCCCTTTGTGTCCATCTTATTTTGGTTATCCCGAATATATCCTTCCCTTACCAAGGATGGAGGTCAACAGGGGACAGTGGGAAAGCCCTTCAACAATGACCATTGAGGAGCCTGCCACAACAGACTCTTTGTCCAGAAGAGATGGAGTGTCTGGCATGCAGACTATTCCTGAAGAATGCAGCCCTAATCATCAAGATTCCCCTGGTACTCAGGTTGTATGGCAGCAAGACAGCATTGATCCTGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGCAGAGGCCTTTCCAAAGAACATATCGATTTGCTTCCAGTCTCAAAGTACAATCTTAAAAGCATGTTTAAAAGAAAAAACTATGGGAAAAGGTGTGTGATTTGTCAGATGACATACAAAAGAGGTGATGAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 849 0.4264 MDYAPGNGTMIVEATSNCILLNSKALDCFFSKYCFNINDNRPMEVHYIDTGFPYPVTESFMDFFEGITYAPANCLHNGSVPDQESANWMMNMSPYKYDMSGPLCPSYFGYPEYILPLPRMEVNRGQWESPSTMTIEEPATTDSLSRRDGVSGMQTIPEECSPNHQDSPGTQVVWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKEHIDLLPVSKYNLKSMFKRKNYGKRCVICQMTYKRGDEQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 282
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0161 282 SMART ring_2 231 271 IPR001841 -
Lele30g0161 282 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 40 278 IPR033276 GO:0004842|GO:0016567|GO:0046621
Lele30g0161 282 ProSiteProfiles Zinc finger RING-type profile. 231 272 IPR001841 -
Lele30g0161 282 FunFam E3 ubiquitin ligase BIG BROTHER 193 276 - -
Lele30g0161 282 SUPERFAMILY RING/U-box 230 276 - -
Lele30g0161 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 276 IPR013083 -
Lele30g0161 282 Pfam Ring finger domain 230 272 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele30g0161 Lele-ChrLele30 1598928 1603941 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0161 39 280 C3H Transcription Factor Family AT3G63530 51.230 5.25e-82 245