Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0159 ATGGAGAAAGGGAAGACTCAGCGATTTCCCAATGGGCAAGAGAGAGAAAACAATAAGTTAAGGGAGAGGAATCAAAGAGCAATGAGACGGAAAATATTTTCTGGTTTGAGAGTTCATGGAAACTATAATCTTCCTAAACATTCAGACACTCTGGACTTGCTTATGGCATTGTGTGAAGAAGCTGGTTGGCATGTTGAAAAATATGGAACCATTTACAGAAAGGATGCTGATACGTCCTTTGTAGGATTGCAGGGTTCAAGTTCTTCTATCAATCAAGCCAACCGTCTGTGA 291 0.4055 MEKGKTQRFPNGQERENNKLRERNQRAMRRKIFSGLRVHGNYNLPKHSDTLDLLMALCEEAGWHVEKYGTIYRKDADTSFVGLQGSSSSINQANRL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0159 96 Pfam BES1/BZR1 plant transcription factor, N-terminal 7 78 IPR008540 -
Lele30g0159 96 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 4 88 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lele30g0159 96 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0159 Lele-ChrLele30 1580087 1580498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0159 27 88 BZR Transcription Factor Family AT1G19350 54.839 9.18e-16 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele30g0159 BES1_N 8.9e-30 No_clan