Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele30g0142 | ATGAGTGTTATGTATAGTCCCAATGTTCTAAATTACTCAGATGGTGAGCTTCGGAGAAACCCAGAAATGGATTCAATTCATCACCACTTGAATTCTGGATTAATGAGGTACGGTTCTGCTCCAAGCTCATTTCTGGCAAGCCTTGTTCATAATGAGGAAGCTTCTAGAAGCATAGATCATCATCATCATCGTCATCGTCAGAATCCATCTTCTTCAAGTGCAGAAATGGAAGCCATGTTGGCAAAGCTGGTTTCTTCATCATCAGACAATGGATGGATCAAGCAGGAAGAAACAGGGGAATCTGTTTCAGAGGGACACAATGGGTATAATAATTCTAATTATGGTTCTCGGATGATTTATCAATCTCAGACTCAGCAGGTTCAAGACTTTCCAAATGGGTCTTTAGGTTCTTCTGGGAATGCTTTTGATGGCTCATTCAATTCATCTGAGTCCGAAGTTAGGTCTAATAATAATAATAATAATCTCTTTAGACAGAAAAGCTCCCCTGCTGGTCTGTTCAACAATTTCTCAGTTGAAAACGGTTTTGCAACATGGGGTGATCATGTTTCAAATGGCCAAGCTTCTACATCAGCTAGGGCATTATCATCTTGTTCAAGACAATTGCCTGATATAGCAGAAGATGGGAATGAAAACCTAGAAGAAGCAACTTGTGTTGAAATTGAAAATAGAAGAAATCTGAGAAATGATAAAAATGGCAACAACAACACTGATGAATGTTACATTCCCAGCTTCACAAGTGACTTCTGGGATTCTCCTTCATTCAATGACACCAAAACAGCTAGTGATAATGATGTACTCATGTTTTCTACTTCAAATGGTTTTGAAACTCAGCAAACAAGCACAGCAGATATGTTGGATTTAGCAGTTGATTATATTAAAGATTTGCAGAAACAAGTTCAGATACTAAAGCAAAGTGCAAGTGTTCAATTTTGGAGAATCCTTACGGAGATGGCTCGTCGGCAGAGTGATTTAGAGGAGGGGATCGACTACATGTTCAAGATTGTGATGATCGGCGACTCTGGCGTCGGGAAATCCCAGCTCTTGAATCGTTATGCTAGGAATGAGTTCAATGCGAAATCGAAGGCGACGATCGGAGTTGAATTTCAGACTAAGACGGTGCTCATGGATCACAAGGTTGCCAGGGCCCAGATTTGGGATACTGCTGGTCAAGAAAGGTCAATAAAGTTTTTCAAAATCACACAGGTACCAGGTGATTACTTTACTACTGCCTATTACAGAGGAGCAATTGGTGCATTGCTGGTATATGACATAACCAGGCAAGATACCTTTGATCATGTTGTAACATGGTTGGAGGAGCTACAAATGCATGCAGATAATAATGTTACTGTTATGTTTGTTGGCAACAAATGTGACCTTGGTTCGATGCGAGTGGTACCTGTGGATGTAGACAAAGAGCTTGCACAGAAGCATGGTCTTTTCTTCATGGAGACATCAGCGGTCGACTCCACCAATGCAGAGCAAGCTTTCCTCGGTCTTCTCTCTCAGATCTAA | 1533 | 0.409 | MSVMYSPNVLNYSDGELRRNPEMDSIHHHLNSGLMRYGSAPSSFLASLVHNEEASRSIDHHHHRHRQNPSSSSAEMEAMLAKLVSSSSDNGWIKQEETGESVSEGHNGYNNSNYGSRMIYQSQTQQVQDFPNGSLGSSGNAFDGSFNSSESEVRSNNNNNNLFRQKSSPAGLFNNFSVENGFATWGDHVSNGQASTSARALSSCSRQLPDIAEDGNENLEEATCVEIENRRNLRNDKNGNNNTDECYIPSFTSDFWDSPSFNDTKTASDNDVLMFSTSNGFETQQTSTADMLDLAVDYIKDLQKQVQILKQSASVQFWRILTEMARRQSDLEEGIDYMFKIVMIGDSGVGKSQLLNRYARNEFNAKSKATIGVEFQTKTVLMDHKVARAQIWDTAGQERSIKFFKITQVPGDYFTTAYYRGAIGALLVYDITRQDTFDHVVTWLEELQMHADNNVTVMFVGNKCDLGSMRVVPVDVDKELAQKHGLFFMETSAVDSTNAEQAFLGLLSQI | 510 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele30g0142 | 510 | ProSiteProfiles | small GTPase Ras family profile. | 327 | 510 | IPR001806 | GO:0003924|GO:0005525 | |
Lele30g0142 | 510 | PANTHER | DRAB11-RELATED | 335 | 510 | - | - | |
Lele30g0142 | 510 | CDD | bHLH_AtbHLH_like | 284 | 309 | IPR045239 | - | |
Lele30g0142 | 510 | Pfam | Ras family | 340 | 509 | IPR001806 | GO:0003924|GO:0005525 | |
Lele30g0142 | 510 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 283 | 320 | IPR036638 | GO:0046983 | |
Lele30g0142 | 510 | SMART | ras_sub_4 | 339 | 510 | - | - | |
Lele30g0142 | 510 | Gene3D | - | 332 | 510 | IPR027417 | - | |
Lele30g0142 | 510 | SMART | rab_sub_5 | 339 | 510 | - | - | |
Lele30g0142 | 510 | MobiDBLite | consensus disorder prediction | 56 | 76 | - | - | |
Lele30g0142 | 510 | TIGRFAM | small_GTP: small GTP-binding protein domain | 337 | 503 | IPR005225 | GO:0005525 | |
Lele30g0142 | 510 | MobiDBLite | consensus disorder prediction | 128 | 158 | - | - | |
Lele30g0142 | 510 | PRINTS | Transforming protein P21 ras signature | 380 | 402 | - | - | |
Lele30g0142 | 510 | PRINTS | Transforming protein P21 ras signature | 488 | 510 | - | - | |
Lele30g0142 | 510 | PRINTS | Transforming protein P21 ras signature | 362 | 378 | - | - | |
Lele30g0142 | 510 | PRINTS | Transforming protein P21 ras signature | 339 | 360 | - | - | |
Lele30g0142 | 510 | PRINTS | Transforming protein P21 ras signature | 453 | 466 | - | - | |
Lele30g0142 | 510 | SMART | rho_sub_3 | 341 | 509 | IPR001806 | GO:0003924|GO:0005525 | |
Lele30g0142 | 510 | FunFam | ras-related protein RABA5a | 331 | 510 | - | - | |
Lele30g0142 | 510 | ProSiteProfiles | small GTPase Rab1 family profile. | 334 | 510 | - | - | |
Lele30g0142 | 510 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 336 | 510 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele30g0142 | Lele-ChrLele30 | 1405184 | 1412364 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele30g0142 | 285 | 312 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G51140 | 75.000 | 3.85e-06 | 47.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele30g0142 | 30 | 1405184 | 1412364 | Lele31g0159 | 31 | 1539866 | 1542046 | hybridization | |
Lele30g0142 | 30 | 1405184 | 1412364 | Lele32g1247 | 32 | 13439654 | 13441769 | hybridization |