Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele30g0137 | ATGGCTTTATCCTCTTCCCTTTTCTCACCACCCCATCTTCTTTCCAATCACACTACAAAATCCATTTCAACTTCTTCAAGATTCTCTAATCACCTTCTGAAATCTGTCTTTCCACAACCCTTTGTCAAATCGGCGCCTTCTCCGGTAGTTACAACACCCAGAAATTACCGGAGACCCTTTGCTGTTGCAGAAGAAACTGTGGTCACTACTTCACCTGACCCGAAATCCGACGCCGCGAGGAAGCTCTATATTGGGAACATTCCACGCAATATCGATAACAATGAGCTTGCCCGGATTGTTGAAGAGCATGGTGCTGTTGAGAGAGCGGAGGTTATGTATGACAAATACTCTGGAAGGAGTCGTCGCTTTGCATTTGTTACAATGAAGACGGTTGAGGATGCAAATGCAGTAGTTGAGAAGCTAAATGGCACTGAAATCGGAGGTCGTGAAATCAAAGTAAATATAACAGAAAAACCTTTGCAAACAGTTGATCTATCTATTCTCCAGGCAGAGGAATCTGAATTTGTTGACAGTCCCCACAAAGTGTATGTAGGAAATCTTGCCAAAACAGTAACAACTGATGTACTTAAAGACTTCTTCTCTTCAAGTGGAAATGTTCTTAGTGCCAAGGTTTCACGTGTTCCTGGGACCTCAAAATCCACTGGTTTTGGTTTTGTCTCATTTTCTTCAGCTGAGGATGTGGAAGCTGCAATCTCATCTTTCAACAATTCCTTGTTAGAAGGGCAACGAATTCGTAAAGTTGATCATCTTTTCCAAGACTGTAATGCTGTTTTGACTGGTCTCAGCAAGGCATTTGCTGCTATTCAACTTACTTTGCCAGAGGATGCAAGGAGGGCACCATTTCATTCTATAACACTGACAGAGGCATTTGACCTTGATGCAATCATGTTGGATGGCATTGACGAGGAGTAA | 933 | 0.4266 | MALSSSLFSPPHLLSNHTTKSISTSSRFSNHLLKSVFPQPFVKSAPSPVVTTPRNYRRPFAVAEETVVTTSPDPKSDAARKLYIGNIPRNIDNNELARIVEEHGAVERAEVMYDKYSGRSRRFAFVTMKTVEDANAVVEKLNGTEIGGREIKVNITEKPLQTVDLSILQAEESEFVDSPHKVYVGNLAKTVTTDVLKDFFSSSGNVLSAKVSRVPGTSKSTGFGFVSFSSAEDVEAAISSFNNSLLEGQRIRKVDHLFQDCNAVLTGLSKAFAAIQLTLPEDARRAPFHSITLTEAFDLDAIMLDGIDEE | 310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele30g0137 | 310 | CDD | RRM_SF | 182 | 252 | - | - | |
Lele30g0137 | 310 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 82 | 152 | IPR000504 | GO:0003723 | |
Lele30g0137 | 310 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 182 | 252 | IPR000504 | GO:0003723 | |
Lele30g0137 | 310 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 80 | 158 | IPR000504 | GO:0003723 | |
Lele30g0137 | 310 | FunFam | 30S ribosomal protein 2, chloroplastic | 167 | 256 | - | - | |
Lele30g0137 | 310 | Gene3D | - | 61 | 163 | IPR012677 | - | |
Lele30g0137 | 310 | PANTHER | OS02G0815200 PROTEIN | 48 | 252 | - | - | |
Lele30g0137 | 310 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 180 | 252 | IPR000504 | GO:0003723 | |
Lele30g0137 | 310 | CDD | RRM_HP0827_like | 81 | 158 | - | - | |
Lele30g0137 | 310 | SUPERFAMILY | RNA-binding domain, RBD | 175 | 252 | IPR035979 | GO:0003676 | |
Lele30g0137 | 310 | SMART | rrm1_1 | 81 | 154 | IPR000504 | GO:0003723 | |
Lele30g0137 | 310 | SMART | rrm1_1 | 181 | 254 | IPR000504 | GO:0003723 | |
Lele30g0137 | 310 | Gene3D | - | 164 | 253 | IPR012677 | - | |
Lele30g0137 | 310 | SUPERFAMILY | RNA-binding domain, RBD | 71 | 158 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele30g0137 | Lele-ChrLele30 | 1381877 | 1385826 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele30g0137 | 35 | 251 | Eukaryotic Initiation Factors Gene Family | AT1G22760 | 24.885 | 1.72e-11 | 63.2 |