Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0125 ATGGAAAAGCCGCGAAACCAAAATCACCACCGTAACCCCGACCACAAGAACAACCACCGCCACCAACATCACCACCGTCAAACATGGGGCAGGTGGGAGGAGCTTCTCCTCGCCTCCGCCGTCAAACGCCATGGCTCCAACGACTGGGACACCGTCGCCATGGAGATCCAGAACCGCACCAACCTCCCTCACCTCCTCACCACCGCACGCAACTGCGAGCAGAAATTCCTCGATCTCGAACGCCGATTCACCGCCCAATGCAACGATGCCGTTCCGGAGCCTCCGGAGAACTGCGCTCCCGCCGGCGACGTCGTCGATCACGTTCCCTGGCTCGACGAATTGCGTAAGCTCCGGGTAGCTGAGCTCCGGCGAGAGGTCCAACGTCACGACCATAAGGTGAAGAGATTGGAGGAAGAGAGAGAAAAAAGCTTGAAGGAGAATGACGCAGAACGAGATGAGAAACCAGATCTGGAAGACTCCGGGAAACCGGAAAACGACGAAAAGAACGGAGGAGGAGAAGAACCTGGACCGGCGAATTCTGAACCGGGGACGCGGGTCGAGGACGATGGAAATGATAATATTAATGAGTCTAATTCGACCGGTTCAAGATCCGCAGGAGAGAAAACCGGGGAGGAAGATATGAAGCCCGAACCGCCTGCGGCTCAAGCCGGGCCGAAAAAACCGGATCCGAGTGATGATAAAAAAGTGGAGGACTCGTCCGAGTGGAGAGACTCGGAGGCCCACTCGGAAGGGGGAGGGACGAGGGAGAGCGGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAGAGGAAGACGCGAAAGAGGAAGAAGGTCTCCGGCGAGGAGGAGGCGCCGGAGAACGACGAGGTGGCCGCGAAATCACAACCGTTGGTTGGCCTCTTGGAGCTGATCAAAGGACATGAAAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAAGCGTGGTACGTGAGCACGTGGACTTAGAAATCATACAAACGCGGCTTCGAAACGGCAACTACTCCTCCGGCACCACCGCCTTCTTCCGTGACCTCTTCCTCCTCTTGACCAACTTCATCACCTTCTTCCCCACCCACTCCCTCCACTCACGCGCCGCCACCCACCTCTGCAACCTCCTCTCCGACGAGATGAGGAACTTCTCCCAACCCCACAATGACAACACCCCTCCTTCACTCCCACCTCCGCCGCCCCCACCGTCGTCATCCTCAGTCAAGCCTGATTCTTCTAATAACAATTTGCTTTCCAAGCACAAGGCTTCTGCTCCCATACTGGTTTGCAGGAAACGCAGTTCCATGTCCAGTAAACCTTCCTCTGCTTCTACCTTTAAGGGTAGTGACCGTTTAAGCAGTGAGAAAAAACCACCACCACCACCACCACCCCAGAAGAGGCCACCGTTGTCGGTTTCTGATGATTCAGATGAAGAACCTCCTTCTCCTCCGCCTCTGCCACCTAAGTCAAAGGAGAAGCCGGTGACCGGAGCAAGAAGCATGAGAAGAGGAAACAAAAACCTCGGTGGTACAGGGGCCGGAGCCACTCAGAACAAGAAGCTTCAGTCCAGTAGTAAGGCAAGCCCTCCCAAATCAGATCACAAAAGCAAAGCAGCGGCAGCGGCAGAAGAAGAAGAAGAACAAGCAGCCTCTGCGTCCGACAAAAAGAGGAGCGCAGCCGCAGATTTCTTGAAAAGGATAAAGAAAAACAGCCCCGGCGAGGCAATGAAGAGCGGTGGTGGGGGCGGCCGACGAGGGGGCCGCGGAAGAGATCAGAAGAAGGTTGTGGGAAGTGGCGGAAAGGGTGAACAAAAGGGTGGGAGGGAGAGAACATTGAGGAATGGTGGTGGAAATAATAGCAATCAGACAACATCAAAGAGAAGTGTAGGGAGGCCACCGAAGAAAGTAGCTGAAAGTAATAACAACAACAACAACAACAACAATAATGCTTCAGGTTCTGCTAAACGTGGAAGGGAAGGTGGTGGGGGGAGTGGAGGGAAGGATAAAAGGCCCAAGAAACGAAGTAGGAAGTAA 2064 0.5475 MEKPRNQNHHRNPDHKNNHRHQHHHRQTWGRWEELLLASAVKRHGSNDWDTVAMEIQNRTNLPHLLTTARNCEQKFLDLERRFTAQCNDAVPEPPENCAPAGDVVDHVPWLDELRKLRVAELRREVQRHDHKVKRLEEEREKSLKENDAERDEKPDLEDSGKPENDEKNGGGEEPGPANSEPGTRVEDDGNDNINESNSTGSRSAGEKTGEEDMKPEPPAAQAGPKKPDPSDDKKVEDSSEWRDSEAHSEGGGTRESGEVQSSASLTRKRKTRKRKKVSGEEEAPENDEVAAKSQPLVGLLELIKGHENSSLFERRLESQEEWEKYKSVVREHVDLEIIQTRLRNGNYSSGTTAFFRDLFLLLTNFITFFPTHSLHSRAATHLCNLLSDEMRNFSQPHNDNTPPSLPPPPPPPSSSSVKPDSSNNNLLSKHKASAPILVCRKRSSMSSKPSSASTFKGSDRLSSEKKPPPPPPPQKRPPLSVSDDSDEEPPSPPPLPPKSKEKPVTGARSMRRGNKNLGGTGAGATQNKKLQSSSKASPPKSDHKSKAAAAAEEEEEQAASASDKKRSAAADFLKRIKKNSPGEAMKSGGGGGRRGGRGRDQKKVVGSGGKGEQKGGRERTLRNGGGNNSNQTTSKRSVGRPPKKVAESNNNNNNNNNNASGSAKRGREGGGGSGGKDKRPKKRSRK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0125 687 MobiDBLite consensus disorder prediction 623 664 - -
Lele30g0125 687 Gene3D - 285 402 IPR036427 GO:0005515
Lele30g0125 687 MobiDBLite consensus disorder prediction 12 26 - -
Lele30g0125 687 ProSiteProfiles Bromodomain profile. 305 377 IPR001487 GO:0005515
Lele30g0125 687 MobiDBLite consensus disorder prediction 594 620 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 540 582 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 465 479 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 394 687 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 136 293 - -
Lele30g0125 687 SMART bromo_6 130 396 IPR001487 GO:0005515
Lele30g0125 687 MobiDBLite consensus disorder prediction 136 171 - -
Lele30g0125 687 ProSiteProfiles Myb-like domain profile. 21 60 IPR001005 -
Lele30g0125 687 CDD Bromodomain 300 383 - -
Lele30g0125 687 Gene3D - 19 78 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 444 459 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 401 417 - -
Lele30g0125 687 Pfam Myb-like DNA-binding domain 26 60 IPR001005 -
Lele30g0125 687 SUPERFAMILY Homeodomain-like 21 61 IPR009057 -
Lele30g0125 687 MobiDBLite consensus disorder prediction 1 27 - -
Lele30g0125 687 SUPERFAMILY Bromodomain 293 398 IPR036427 GO:0005515
Lele30g0125 687 MobiDBLite consensus disorder prediction 227 253 - -
Lele30g0125 687 SMART sant 25 82 IPR001005 -
Lele30g0125 687 CDD SANT 28 60 IPR001005 -
Lele30g0125 687 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 13 687 - -
Lele30g0125 687 Coils Coil 545 572 - -
Lele30g0125 687 MobiDBLite consensus disorder prediction 520 539 - -
Lele30g0125 687 Coils Coil 119 153 - -
Lele30g0125 687 Pfam Bromodomain 300 380 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0125 Lele-ChrLele30 1275717 1280745 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele30g0125 Bromodomain 6.6e-10 No_clan