Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele30g0094 | ATGGCTACCACTACAACCGCCGCCGCCGCTCCTCCCCGCCAGCTGTCCCAGAAGGAGGCTGACATCCAGATGATGTTGGCCGCCGAGGTCCACCTCGGAACCAAAAACTGCAACTTCCAAATGGAGCGATATGTGTTCAAGCGCCGCAATGATGGTATCTACATCATTAATCTTGGAAAGACATGGGAGAAGCTTCAGCTTGCTGCTAGGGTTATTGTTGCCATTGAGAACCCTCAAGATATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTCTCAAGTTTGCTCAATACACTGGTGCCCATGCACTTGCTGGGAGACACACCCCAGGAACCTTCACTAATCAGCTCCAGACCTCTTATAGCGAGCCTCGCCTTCTAATTCTTACTGATCCAAGAACCGACCATCAGCCCATCAAGGAAGCTGCTCTTGGAAATATTCCAACTATTGCTTTTTGTGACACTGATTCTCCCATGCGATACGTTGATATTGGGATTCCTGCCAACAACAAGGGGAAACACAGCATTGGTTGCCTTTTCTGGCTTTTAGCAAGGATGGTACTGCAGATGCGTGGTACTATTCGTCCGGGGCTCAAGTGGGATGTGATGGTGGACTTATTCTTCTATAGAGAACCTGAGGAGGCCAAGCAACTAGAGGAAGAGGAGACGCCTGCTGTCCAAGACTATGCTGCTGCTGATTTCGGTGCCGGTATTGGTGCCATTGCTGATGGCCAGTGGCCTGTTGCAACTGATCAACCATGGACTGAACAGGTAGCACAACCTATTCCGGCAGCTTCTGGTGTCAGCTGGACCCCAGAAGCTACAGGGGATTGGGGTGAACCCGTCCAAGCTCCACAAGTTCCTGTTCCCGGAACTGGAATCGAGAACGTTCCTGCTACCGGCTGGGATTAA | 918 | 0.5098 | MATTTTAAAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQLEEEETPAVQDYAAADFGAGIGAIADGQWPVATDQPWTEQVAQPIPAASGVSWTPEATGDWGEPVQAPQVPVPGTGIENVPATGWD | 305 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele30g0094 | 305 | ProSitePatterns | Ribosomal protein S2 signature 1. | 22 | 33 | IPR018130 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | Hamap | 40S ribosomal protein SA [rps-0]. | 9 | 283 | IPR027498 | GO:0003735|GO:0006412|GO:0015935 | |
Lele30g0094 | 305 | TIGRFAM | uS2_euk_arch: ribosomal protein uS2 | 17 | 213 | IPR005707 | GO:0003735|GO:0006412|GO:0015935 | |
Lele30g0094 | 305 | CDD | RPS2 | 25 | 191 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | SUPERFAMILY | Ribosomal protein S2 | 17 | 207 | IPR023591 | - | |
Lele30g0094 | 305 | Pfam | Ribosomal protein S2 | 123 | 189 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | Pfam | Ribosomal protein S2 | 25 | 120 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | MobiDBLite | consensus disorder prediction | 285 | 305 | - | - | |
Lele30g0094 | 305 | FunFam | 40S ribosomal protein SA | 21 | 227 | - | - | |
Lele30g0094 | 305 | Gene3D | - | 21 | 227 | - | - | |
Lele30g0094 | 305 | PRINTS | Ribosomal protein S2 signature | 52 | 61 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | PRINTS | Ribosomal protein S2 signature | 143 | 154 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | PRINTS | Ribosomal protein S2 signature | 126 | 143 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | PRINTS | Ribosomal protein S2 signature | 101 | 118 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | PRINTS | Ribosomal protein S2 signature | 164 | 178 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | PRINTS | Ribosomal protein S2 signature | 22 | 40 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Lele30g0094 | 305 | PANTHER | 40S RIBOSOMAL PROTEIN SA | 12 | 289 | IPR005707 | GO:0003735|GO:0006412|GO:0015935 | |
Lele30g0094 | 305 | ProSitePatterns | Ribosomal protein S2 signature 2. | 126 | 150 | IPR018130 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele30g0094 | Lele-ChrLele30 | 1019434 | 1021400 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele30g0094 | 1 | 305 | Cytoplasmic Ribosomal Protein Gene Family | AT3G04770 | 70.033 | 2.05e-151 | 424 |