Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0094 ATGGCTACCACTACAACCGCCGCCGCCGCTCCTCCCCGCCAGCTGTCCCAGAAGGAGGCTGACATCCAGATGATGTTGGCCGCCGAGGTCCACCTCGGAACCAAAAACTGCAACTTCCAAATGGAGCGATATGTGTTCAAGCGCCGCAATGATGGTATCTACATCATTAATCTTGGAAAGACATGGGAGAAGCTTCAGCTTGCTGCTAGGGTTATTGTTGCCATTGAGAACCCTCAAGATATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTCTCAAGTTTGCTCAATACACTGGTGCCCATGCACTTGCTGGGAGACACACCCCAGGAACCTTCACTAATCAGCTCCAGACCTCTTATAGCGAGCCTCGCCTTCTAATTCTTACTGATCCAAGAACCGACCATCAGCCCATCAAGGAAGCTGCTCTTGGAAATATTCCAACTATTGCTTTTTGTGACACTGATTCTCCCATGCGATACGTTGATATTGGGATTCCTGCCAACAACAAGGGGAAACACAGCATTGGTTGCCTTTTCTGGCTTTTAGCAAGGATGGTACTGCAGATGCGTGGTACTATTCGTCCGGGGCTCAAGTGGGATGTGATGGTGGACTTATTCTTCTATAGAGAACCTGAGGAGGCCAAGCAACTAGAGGAAGAGGAGACGCCTGCTGTCCAAGACTATGCTGCTGCTGATTTCGGTGCCGGTATTGGTGCCATTGCTGATGGCCAGTGGCCTGTTGCAACTGATCAACCATGGACTGAACAGGTAGCACAACCTATTCCGGCAGCTTCTGGTGTCAGCTGGACCCCAGAAGCTACAGGGGATTGGGGTGAACCCGTCCAAGCTCCACAAGTTCCTGTTCCCGGAACTGGAATCGAGAACGTTCCTGCTACCGGCTGGGATTAA 918 0.5098 MATTTTAAAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQLEEEETPAVQDYAAADFGAGIGAIADGQWPVATDQPWTEQVAQPIPAASGVSWTPEATGDWGEPVQAPQVPVPGTGIENVPATGWD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0094 305 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 Hamap 40S ribosomal protein SA [rps-0]. 9 283 IPR027498 GO:0003735|GO:0006412|GO:0015935
Lele30g0094 305 TIGRFAM uS2_euk_arch: ribosomal protein uS2 17 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lele30g0094 305 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 SUPERFAMILY Ribosomal protein S2 17 207 IPR023591 -
Lele30g0094 305 Pfam Ribosomal protein S2 123 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 MobiDBLite consensus disorder prediction 285 305 - -
Lele30g0094 305 FunFam 40S ribosomal protein SA 21 227 - -
Lele30g0094 305 Gene3D - 21 227 - -
Lele30g0094 305 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele30g0094 305 PANTHER 40S RIBOSOMAL PROTEIN SA 12 289 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lele30g0094 305 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0094 Lele-ChrLele30 1019434 1021400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0094 1 305 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.033 2.05e-151 424