Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0051 ATGGATTACATATCGATTTCGACCTTGTTCATCGTGATTCGCCATTATCACCATTCTACAACTCTTCAACCAGCATCTCAGACCTCGCTCGGAACGTTAGGTTGCGATCCCAGATTCGATCAAGACGACGACGTCGTCGTTTTTTTTCTCCAAACTGATGTACTCGCACCAGTTGTTGAACAAGGTGAAGGAGAGTACCTCATGAGAATCTACTGCGTGTACGAATATGGATATGCGGATGGCTCAACTACTTCTGGAGAATTGGCGAGAGATTTCTTCAGCTTTAGGGCAAAATCTGCTTCGTTTAATAAGTCTTTGTTAGTGTTTGGATGTGGACATAACAATAGTGGCATATTCTCAAGCAAAGGTTCTGAGATTGGTTACAAATTCTCATACTGTTTGGTTCCTTACTTCTCAAACTCCACCAGTAAGCTGAAACTGGGTGATGAAGCCAAGATATCATCTGGATCATCATCAAATGGAGTTGTAGTGTCCACTCCAGTTATAATTGATGATGGAAGTTACTTCCTCACACTTGAAGGTGTCACAGTTGGAAACAAGACAGTGAAGACAGGTCCCAAAAGAGCGGGTAACACACTTATTGATTCAGGAGCAACGTGGTTTCTAATGGAAAGAGGCTTTTACCTGCAGGTTGAGGCTTTGATAAAGGATTCAATTGGGGTTGAAGAAGTCAAAAACGCTTCTGATCTATACAATTTGTGTTACTCAAACATGCATGCTGAATCTATCATGAACAAGTTTCCATATTTCGTGGTTCATTTCAAGGGTGGTGCTGACGTGTACTTGAAGCCTCTTCATAACATATTCTTTCCTCAGGACGATTTCATTTGCTTAGCAATATTCCCAATCGACGAGGGATCAGGATTCGAATATGGGAATATTTCACAGGTTTCGTTTCGAGCAGTTACCATGGCTCTGACCTCCTACTTCAACTGGGATAGTTGTCTTCAAGCTGATCTGAACCTAGAAGCGAGTTTCTTCCATGAAGCAACCCCAGAAGAAGAAGAAGTACTGGTTGCACCAGATTATTTTAACTATAATAACCACCACCTCCTCCTTCCTTATTACTGTAACTCACTCGATCCAAACGCGTCCTATCTCGATCCATATAGTAGTAACTTTCTTTACCCTCGTGAACTTGTTCCCTATGATCCCTGCATATATGAGAATAGCCTGCTTCCATGTCCAAAACGGCAGAAGTACTTGTCGTATGATCAGAGTTTGATGATGGACTTGAATATTATTGCACCAACGAATAGTAGTTTCTTGGATGGGAATATCGTTGTGCCGAATGTTGCAGAGTTTTATTATGATGAGGTTAATGCAGTAGTGGGGAATGCAGAGAGTGTGATGGCAGCGGTGGTGGAAGAAGGAGGAGGGAGGAAGAATACTGAGAAGCCGACAATGGTGTCGGGGCAGAGTGTGGAGGCGAGGGAGAGGAGAAGGAAGATAACGGAGAAGACACAAGAGCTAGGAAAGCTGGTTCCTGGTGGCTCAAAGATGAACACAGCTGACATGCTTCATGCTGCTTCTAAATATGTCAACTACTTGAAAGCTCAAGTTGCCATGCTTCAACTCATCAACACACTCCAGGAAGATAGGGTATCATTGAGTGTGAATGAAGAAATGCAGAAGCTGGTTACTTGTTCAGTTGTTGAAGAAAAGATGTACATGGAAGAGAAATGCTTTGTTCCAAAAGATTTTGTGACCACCTTGACAAATCATAAAGACATTCAATCAACACCTTCCATCCTTAAAGACCTTAATCAGTTCATTTCGACAGACACACAGATTAAAGAACAGTGA 1827 0.422 MDYISISTLFIVIRHYHHSTTLQPASQTSLGTLGCDPRFDQDDDVVVFFLQTDVLAPVVEQGEGEYLMRIYCVYEYGYADGSTTSGELARDFFSFRAKSASFNKSLLVFGCGHNNSGIFSSKGSEIGYKFSYCLVPYFSNSTSKLKLGDEAKISSGSSSNGVVVSTPVIIDDGSYFLTLEGVTVGNKTVKTGPKRAGNTLIDSGATWFLMERGFYLQVEALIKDSIGVEEVKNASDLYNLCYSNMHAESIMNKFPYFVVHFKGGADVYLKPLHNIFFPQDDFICLAIFPIDEGSGFEYGNISQVSFRAVTMALTSYFNWDSCLQADLNLEASFFHEATPEEEEVLVAPDYFNYNNHHLLLPYYCNSLDPNASYLDPYSSNFLYPRELVPYDPCIYENSLLPCPKRQKYLSYDQSLMMDLNIIAPTNSSFLDGNIVVPNVAEFYYDEVNAVVGNAESVMAAVVEEGGGRKNTEKPTMVSGQSVEARERRRKITEKTQELGKLVPGGSKMNTADMLHAASKYVNYLKAQVAMLQLINTLQEDRVSLSVNEEMQKLVTCSVVEEKMYMEEKCFVPKDFVTTLTNHKDIQSTPSILKDLNQFISTDTQIKEQ 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0051 608 Gene3D Acid Proteases 61 148 IPR021109 -
Lele30g0051 608 Pfam Xylanase inhibitor C-terminal 175 292 IPR032799 -
Lele30g0051 608 PANTHER OS07G0603500 PROTEIN-RELATED 23 308 - -
Lele30g0051 608 SMART finulus 481 530 IPR011598 GO:0046983
Lele30g0051 608 SUPERFAMILY Acid proteases 71 292 IPR021109 -
Lele30g0051 608 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 482 536 IPR036638 GO:0046983
Lele30g0051 608 Gene3D - 480 540 IPR036638 GO:0046983
Lele30g0051 608 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 475 524 IPR011598 GO:0046983
Lele30g0051 608 Pfam Helix-loop-helix DNA-binding domain 485 525 IPR011598 GO:0046983
Lele30g0051 608 Gene3D Acid Proteases 156 309 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0051 Lele-ChrLele30 592358 600972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0051 312 600 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 32.895 1.59e-29 116