Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0050 ATGTCTTCTCTTGTGCTTCTTTGGGTTGTTCCATTCTGCGGGTCTTTCATCTCTGGGCCCTCATAAGAGGTCATTTTTGTTTGGTTGGGCTCCTTGTGTTCTATGGCTTCTTCAATACAACCTGTTTCCACGGATGAGCCGGTTGTTACTGCAGCTTGGCTTCATGCTAACCTTAAGGACCCTGACTTGAAGGTACTGGATGCATCCTGGTACATGCCAGATGAGCAGAGAAACCCCTTTCAAGAATATCAGGCTGCACGCATTCCTGGAGCCCTTTTCTTTGACTTAGACAGAATAGCAGATCTAACTACAGATTTGCCTCATATGTTGCCATCAGAGGAAGCTTTCGCTGCTGCTGTGTCTGCTTTCCACATAGCAAACGAAGAAAGAGTGGTTGTTTATGATGGCAAAGGAATATTTAGCTCACCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAAAGTTTGGGTATTAGATGGTGGACTGCCAAAATGGCGTGCATCAGGATATGACATCGAAACTAGTGCTTCTAGTGATGCTATATTAAAATCCAGTGCTGCCGCTGAGGTAGTAGAGAAAGTATATCGGGGACAGTCAGTTGGCCCAATCACATTTCAAACTAAACTTCAGCCGCATCTTGTTTGGTCCATGGAACAGGTAAAGAGAAACACTGGGGAAAAAAGCTACCAGCACATAGATGCACGATCAAAGCCTAGGTTTGATGGAGCAGCACCTGAACCCCGAAAAGGTATCCAAAGTGGTCATATACCTGGAAGCAAGTGCATTCCTTTCTTCCAGTTGTTGGATGCTTCACAGACACTGTTACCAGCAGATGAAATCAAGAAGCGAGTTGATCAAGAAGGTATCTCTTTGGATGGCCCCATCATGGCATCATGTGGCACCGGCGTCACTGCTTGCATTCTCGTATTGGGCCTCCACCGTCTTGGGAAGTCTGACATTGCAGTCTACGATGGGTCTTGGACTGAATGGGCATTACAATCTGATACGGCTAAAGAAACTTCATGA 1032 0.4612 MSSLVLLWVVPFCGSFISGPSXEVIFVWLGSLCSMASSIQPVSTDEPVVTAAWLHANLKDPDLKVLDASWYMPDEQRNPFQEYQAARIPGALFFDLDRIADLTTDLPHMLPSEEAFAAAVSAFHIANEERVVVYDGKGIFSSPRVWWMFRVFGHDKVWVLDGGLPKWRASGYDIETSASSDAILKSSAAAEVVEKVYRGQSVGPITFQTKLQPHLVWSMEQVKRNTGEKSYQHIDARSKPRFDGAAPEPRKGIQSGHIPGSKCIPFFQLLDASQTLLPADEIKKRVDQEGISLDGPIMASCGTGVTACILVLGLHRLGKSDIAVYDGSWTEWALQSDTAKETS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0050 343 Pfam Rhodanese-like domain 219 334 IPR001763 -
Lele30g0050 343 Pfam Rhodanese-like domain 50 169 IPR001763 -
Lele30g0050 343 ProSiteProfiles Rhodanese domain profile. 227 341 IPR001763 -
Lele30g0050 343 Gene3D - 212 342 IPR036873 -
Lele30g0050 343 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 220 339 IPR036873 -
Lele30g0050 343 FunFam Sulfurtransferase 41 183 - -
Lele30g0050 343 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 46 178 IPR036873 -
Lele30g0050 343 FunFam Sulfurtransferase 212 343 - -
Lele30g0050 343 Gene3D - 42 183 IPR036873 -
Lele30g0050 343 PANTHER THIOSULFATE SULFERTANSFERASE 45 342 IPR045078 GO:0016783
Lele30g0050 343 CDD TST_Repeat_1 48 171 - -
Lele30g0050 343 SMART rhod_4 49 173 IPR001763 -
Lele30g0050 343 SMART rhod_4 217 338 IPR001763 -
Lele30g0050 343 ProSiteProfiles Rhodanese domain profile. 59 176 IPR001763 -
Lele30g0050 343 CDD TST_Repeat_2 218 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0050 Lele-ChrLele30 585029 591345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0050 38 342 Sulfurtransferasese or Rhodanese AT1G79230 74.098 2.68e-176 490