Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0042 ATGCCGTTTTTAAATACCTTCAACTTAAATCAATATAGGGGCCTGAATATTCTGAAGTGCGAGCCATCATACAGTTGCATGATCGATCAGCTTCATATGGCTTCTTCTTCTTCTTCTTCTTCACCAGCGATAGCCTTTGCAATTGCTTTTTCTGTTTGTGTGTTCTTGAGCTGCTTGCTCGGTGCATCATCACAAGATCAAAACTTTACAACGGATCCTTCTGAAGCTAGAAGTTTGAATTCAATCTTCCACAAATGGCGTATATCGGCATTACCAAATGTGTGGAATATAAGCGGCGAGCTATGCAGCGGACGAGCCATCGACGGCAACACCGGAATTAATGTCTTAAATCCATTCATCAAATGCGACTGTTCCAGTGGCAATACATGCCACATTACTGAACTGATCGTTTATGAATTGGATGTTGTTGGGGAAATCCCAGAAGAGCTATGGACTCTCACTTACCTTACCAATTTGGACCTTCGCCATAATTACTTGACGGGTTCTCTACCTCCAGCCATTGGAAAGCTCACTCGTATGCAGTACTTGTCCTTTGGCATCAATTCTTTATCAGGGGAGCTTCCGAAGGAATTGGGAAGTCTTACCGAGTTAATATCATTGAGTGTTGCAGGAAACAACTTCTCAGGTTCTATCCCATCCGAACTAGGGAATCTGAAGAGATTACAACAACTCTACATACATAGTTCGGGACTTAGTGGTCAGATTCCTCCTACTTTTGATAATCTTAAAAACCTGAATACATTGTGGGCTTCAGATACGGAACTCACAGGCAGGATTCCTGACTTCATAGGAAGTTGGTCTCAGTTGACAGATTTGAGGCTTCAGGGTAATTCTTTTGAAGGACCAATACCAACATCATTTGTAAATCTGACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGCATTTATGTGGAATATGAAGTCTTTGAATGTCTTAGTACTGAGGAATAACGATATTTCTGATTCAATTCCATCCAATATTGGTGAATTTCAGAATTTGAAACAGCTGGATTTGAGCTTCAACAATATCATGGGACAGATTCCGATATCACTTTTCAATCTGAGCTCACTAGCTAACTTATTTCTTGGAAACAACAAACTCAGTGGTACTATCCCTACCCAGATAAGCCCGTCTCTTCTCAATGTAGACTTGTCCTACAACAGTCTATCAGGGAGGCTCCCTTCTTGGGTAAACCAACCAAATTTACTTGTCAATTTGGTTTCCAACAACTTGACAATAGATTATTCAGATAGCAGTGGTCTTCCTTCTGGACTTGAATGTTTGCAGCGAAATTTTCCCTGCCATCGAGGTCAGGGAAGATATTATGATTTCGCGATCAAGTGTGCTGGTACTACAGTTACAACATCAGACGGAACTGAATATGAAAGTGAGAAAGAGGCACTTGGTGCTGCTACTTACTTTGTCACGGATACAAGAAGATGGGCAGTGAGCAATGTCGGGATATTTACCGGGTCAAATAATCCTCTATATAATAAATCTGTGCTTAGGCAGTTCGCTGGTACTTTGGACCCAGAGCTCTTCCAGACTGCCCGGGTCTCGGCTTCTTCACTGAGATATTATGGCCTGGGACTCGAAAATGGGGCTTACAACATCTCCCTCTATTTCGCAGAATTATCTATTCTAGATATTAATACTTCATGGAAAAGTCTTGGAAGACGAGTATTTGATATATATATCCAGGGGAATCGTGTTTTGAAGGATTTTAACATAAAAAGGGAAGCTGGGGGAGCCTCTTTTAAACCTGTTCAAAAGGATTTTCATGGCATTCATGTGTCAGAAAACTATCTAGAGATCCATCTCTTTTGGGCTGGAAAAGGTACTTGCTGCATACCCAACCAAGGTACTTATGGTCCTATTATTTCAGCAATCAGAGCTCGTCCAGATTTCATTCCCACTGTCAGCAACAGACCTCCAACCAATGAAAAGGACAGAACTGGTCTGATAGTGGGAATTGTTGTTGGTATTGGAGGAGTAAGCTTTCTGTTTTTTCTTGTGGTTTTCTGTATCATTCAGAGAAGAAAGCATCATGAAGATGATGATGGTGAAGAGTTCTTAGGTATCGATACAAAGCCATACACTTTTAGCTATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCTGAGAACAAGCTGGGCGAGGGAGGTTTTGGACCTGTTTATAAGGGAACACTTAACGATGGAAGAGTAACTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAAAGCCAATTCATAGCTGAGATTGCCACTATATCTGCTGTGCAACATCGTAATCTTGTTAAATTATATGGATGTTGCATTGAAGGAAATAAAAGACTTCTTGTTTATGAGTATCTAGAAAATAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTTAATTCTTAATTGGCCCACGCGCTATGATATCTGCATGGGCGTAGCTAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTACGCATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTGCTTGATCGCGAGCTTGTCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATACGATGACAAAAAGACCCATATAAGCACCCGTGTTGCCGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGCGTTTTGGCCCTAGAGATGGTTAGTGGAAGGCCGAATTCTGATTCAAACTTGGAAGGGGAGAAGATCTATCTTCTAGAATGGGCATGGCAGCTGCATGAACTGAACTGTATGGTTGAACTGGCAGATCCTAGACTGTTATCGGATTTCAATGAGGAAGAATTTAAGAGAATTATAGGGATATCTCTTCTGTGCACTCAAACTTCACCATTGTTAAGGCCGGCGATGTCTCGGGTCGTGGCGATGCTTTCTGGAGATATGGAAGTGAGCACCGTGAGTTCGAGGCCTGGTTACTTGACGGACTGGAAATTTGATGATGATGACAGTTTCGTGCCTGGCTTGGCTACAATGGGATCAGAAACGAGGACCAGCATTGTCACTACTGCCACTGCAAACCAATCACCTTTAGATGCTTCTAAACCCATCCTTCGTTGTTAA 3177 0.4167 MPFLNTFNLNQYRGLNILKCEPSYSCMIDQLHMASSSSSSSPAIAFAIAFSVCVFLSCLLGASSQDQNFTTDPSEARSLNSIFHKWRISALPNVWNISGELCSGRAIDGNTGINVLNPFIKCDCSSGNTCHITELIVYELDVVGEIPEELWTLTYLTNLDLRHNYLTGSLPPAIGKLTRMQYLSFGINSLSGELPKELGSLTELISLSVAGNNFSGSIPSELGNLKRLQQLYIHSSGLSGQIPPTFDNLKNLNTLWASDTELTGRIPDFIGSWSQLTDLRLQGNSFEGPIPTSFVNLTSLTELRISEISNGSSSLAFMWNMKSLNVLVLRNNDISDSIPSNIGEFQNLKQLDLSFNNIMGQIPISLFNLSSLANLFLGNNKLSGTIPTQISPSLLNVDLSYNSLSGRLPSWVNQPNLLVNLVSNNLTIDYSDSSGLPSGLECLQRNFPCHRGQGRYYDFAIKCAGTTVTTSDGTEYESEKEALGAATYFVTDTRRWAVSNVGIFTGSNNPLYNKSVLRQFAGTLDPELFQTARVSASSLRYYGLGLENGAYNISLYFAELSILDINTSWKSLGRRVFDIYIQGNRVLKDFNIKREAGGASFKPVQKDFHGIHVSENYLEIHLFWAGKGTCCIPNQGTYGPIISAIRARPDFIPTVSNRPPTNEKDRTGLIVGIVVGIGGVSFLFFLVVFCIIQRRKHHEDDDGEEFLGIDTKPYTFSYSELKNATDDFNPENKLGEGGFGPVYKGTLNDGRVTAVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGNKRLLVYEYLENKSLDQALFGNCLILNWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDRELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEMVSGRPNSDSNLEGEKIYLLEWAWQLHELNCMVELADPRLLSDFNEEEFKRIIGISLLCTQTSPLLRPAMSRVVAMLSGDMEVSTVSSRPGYLTDWKFDDDDSFVPGLATMGSETRTSIVTTATANQSPLDASKPILRC 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0042 1058 Gene3D Ribonuclease Inhibitor 95 241 IPR032675 -
Lele30g0042 1058 Gene3D Ribonuclease Inhibitor 313 433 IPR032675 -
Lele30g0042 1058 Gene3D Phosphorylase Kinase; domain 1 690 803 - -
Lele30g0042 1058 Pfam Protein kinase domain 730 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0042 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 55 1021 - -
Lele30g0042 1058 FunFam Os05g0263100 protein 76 310 - -
Lele30g0042 1058 SUPERFAMILY Protein kinase-like (PK-like) 711 1012 IPR011009 -
Lele30g0042 1058 FunFam Leucine-rich repeat receptor-like protein kinase 697 803 - -
Lele30g0042 1058 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Lele30g0042 1058 FunFam Putative LRR receptor-like serine/threonine-protein kinase 804 1008 - -
Lele30g0042 1058 FunFam Putative LRR receptor-like serine/threonine-protein kinase 311 434 - -
Lele30g0042 1058 SMART serkin_6 728 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0042 1058 ProSiteProfiles Protein kinase domain profile. 728 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0042 1058 Pfam Malectin domain 458 645 IPR021720 -
Lele30g0042 1058 Gene3D Ribonuclease Inhibitor 242 312 IPR032675 -
Lele30g0042 1058 CDD STKc_IRAK 734 996 - -
Lele30g0042 1058 SUPERFAMILY L domain-like 124 442 - -
Lele30g0042 1058 FunFam Leucine-rich repeat receptor-like protein kinase 456 649 - -
Lele30g0042 1058 Gene3D - 457 648 - -
Lele30g0042 1058 Gene3D Transferase(Phosphotransferase) domain 1 804 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0042 Lele-ChrLele30 461084 478367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0042 137 310 Receptor kinase-like Gene Family AT1G56120 28.249 3.01e-11 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0042 Pkinase 2.5e-45 CL0016