Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0035 ATGTGTGGTCACCACGATAGCTTCATCAAAAACCATATTCCCAATAATGGGGCAGCACTAGATCATGTTTCTTCAGTATTGGAATGTGATACTATGTCTTCGTCTTGGTTTCCTGAGTTTTCTGATCAGCTAGCAGGGAACTTATCAGACTTGGCCTTTCCGGTGATTTATGGCGGCGGCGCTGATGGCGGTTTCCAGAGTTTGAACGGTGGCGGATACAAACCATCGCACCATCTGATGGGTGACTTTGGTGAAGAATGTTGCGGGTTTGTGGATGATATTATTAAGCCAGCTTCTTATCCAAATTACGCCGCAGAAAAGTGGGGATCATATCAAGGAAATCAAATGGCAGCAGTTGAGGAACCAAACATAAAGTTAGGACGATACACAGAAGAAGAAAGGAAGGAGAGAATTCTCCGATATTTGAAGAAAAGAAACCAAAGAAACTTCAACAAAACCATCAAGTATGCTTGTCGGAAAACTCTAGCTGATCGTAGAGTCAGAGTTAGAGGAAGGTTTGCCAGAAACAACGACCTCTGTGAGGATGAAATCGCCGTGAAGAAGACTAAGAATATTAGTCGCAAGCAGGACCTGTACGGTGGTGATGATTCCATCCAATTTCAGATAAAGAACGATGATGATGAGGACGATTGGTTGCAAGAGGCAATGGCAAGTTTGGTGTATCTGTCTCATTCTTCGCCTGAAGATATGTATAGAGCATCGATCGATGAAGAAAGTTTGAGAAAAAGCTGA 753 0.4303 MCGHHDSFIKNHIPNNGAALDHVSSVLECDTMSSSWFPEFSDQLAGNLSDLAFPVIYGGGADGGFQSLNGGGYKPSHHLMGDFGEECCGFVDDIIKPASYPNYAAEKWGSYQGNQMAAVEEPNIKLGRYTEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNDLCEDEIAVKKTKNISRKQDLYGGDDSIQFQIKNDDDEDDWLQEAMASLVYLSHSSPEDMYRASIDEESLRKS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0035 250 Pfam CCT motif 134 176 IPR010402 GO:0005515
Lele30g0035 250 ProSiteProfiles CCT domain profile. 134 176 IPR010402 GO:0005515
Lele30g0035 250 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 101 201 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0035 Lele-ChrLele30 394229 395505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0035 89 181 C2C2-CO-like Transcription Factor Family AT5G24930 38.710 5.58e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele30g0035 CCT 7.3e-17 CL0281