Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0034 ATGAAGGAAGGTGGTAGAAAACATGGTGCCATGTCGCCGTGTGCGGCGTGCAAGCTTCTCCGGAGGAGATGTGCTCAAGATTGCCTCTTTGCTCCTTACTTTCCTGCGGATGAACCCCACAAATTTGCAAGTGTTCACAAGGTTTTTGGTGCTAGCAATGTCAACAAAATGCTACAGGAACTACCAGAGGAGCAAAGGATTGATGCAGTGAGTTCAATGGTATATGAAGCCAATGCGAGGATGAGGGACCCAGTTTATGGATGTGTGGGGGCCATATCCTATCTTCAGCAACAAGTTGATGTGCTCCAAACGCAGCTTGCTCTTGCTCAGGCCGAGCTCGTTCACATCAGAAATCACCAACCTTCTTCTTCTTCTTCTCCGAGCCAACCCCAATCCTCCTCTCATGGCAAGTCTTCTCTTTTTGCCGTGGACAATGTCACCGAGTCCTTGTGGTCTTGCTAG 462 0.4913 MKEGGRKHGAMSPCAACKLLRRRCAQDCLFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEEQRIDAVSSMVYEANARMRDPVYGCVGAISYLQQQVDVLQTQLALAQAELVHIRNHQPSSSSSPSQPQSSSHGKSSLFAVDNVTESLWSC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0034 153 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lele30g0034 153 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 135 - -
Lele30g0034 153 Coils Coil 92 112 - -
Lele30g0034 153 MobiDBLite consensus disorder prediction 118 138 - -
Lele30g0034 153 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0034 Lele-ChrLele30 379954 383118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0034 1 153 AS2 family AT1G31320 64.368 8.92e-65 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele30g0034 LOB 1e-42 No_clan