Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0033 ATGGATCATATATTGGAAGATTTGAGAAGCACAGAGGAGTTTGAAGAACTTCCAGGGTTTCGATTCCATCCAACAGATGAAGAACTCGTGAGATTCTACCTCAGAAGGAAGCTTGACAATAAACCCACCAGCATCGAACTCGTCAAGCAGATTGATATTTACAAATACGATCCTTGGGATCTTCCGAAAGCTAGTTGTATGGGAGGAGAGAAGGAGTGGTACTTCTACTGCAGAAGGGGAAGGAAGTACAAGAACAGCATAAGGCCGAATAGAGTGACTGGATCAGGGTTCTGGAAAGCAACAGGCATAGACAAGCCTGTCTATTCTCTTGCAGGAGACTGCATTGGCCTCAAGAAAACCCTCGTTTACTATCGTGGCAGCGCCGGTAAAGGCACCAAAACTGACTGGATGATGCATGAGTTTCGCCTCCCTTCCAACAACGTCAATAATCCCCAAGAAGCTGAAATTTGGACAGTGTGTAAAATTTTCAAAAGAAATGTGACGCAAAGAAAGTGCACACCAGATTGGAGGCAGTTGGCTGCAAAGCGACGTCGTTGCAGTGACAATAAGATGAGTAGATCAATGAGCATTAATAATAATACTGTAGAGTCTTGCAATAGTACTGTTACTTATGATCCAGAAGCATATATCAACTTTGGAGGCAGCCCAGATCATCATCAGCAGAAACCTCTTGTTTATAACTATAGTACGATGAGCAATAATCGTTATAATGAGCAAAGGAATCATCAATATGTGAGCCACAACTTCAGCACTTCAATGGTGGCACAGCAGCCTCATAATCAATTAACTCCGTCGTCATCACCATCACCATCGTCAGCTTTAAGCTTCTGGGCTAATAACCAGCAGCAGGCTTCCAATAATGATGACCTGTTTGCGTTAGAGAACTCATGGGATGAGCTTGAATCAGTCGTGCAGTTTTGCTCTTGA 948 0.4335 MDHILEDLRSTEEFEELPGFRFHPTDEELVRFYLRRKLDNKPTSIELVKQIDIYKYDPWDLPKASCMGGEKEWYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSLAGDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNNVNNPQEAEIWTVCKIFKRNVTQRKCTPDWRQLAAKRRRCSDNKMSRSMSINNNTVESCNSTVTYDPEAYINFGGSPDHHQQKPLVYNYSTMSNNRYNEQRNHQYVSHNFSTSMVAQQPHNQLTPSSSPSPSSALSFWANNQQQASNNDDLFALENSWDELESVVQFCS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0033 315 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele30g0033 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 267 - -
Lele30g0033 315 MobiDBLite consensus disorder prediction 261 281 - -
Lele30g0033 315 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Lele30g0033 315 ProSiteProfiles NAC domain profile. 16 165 IPR003441 GO:0003677|GO:0006355
Lele30g0033 315 FunFam NAC domain-containing protein 35 25 168 - -
Lele30g0033 315 SUPERFAMILY NAC domain 11 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0033 Lele-ChrLele30 365360 367121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0033 6 176 NAC Transcription Factor Family AT5G39820 55.779 1.99e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele30g0033 NAM 2.7e-35 No_clan