Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0029 ATGGACACAAACACTTCTCACAAGTCAAAATCCCATATCCAGAGCAGTGCAATAACCAGGCCTTTCCATCAATCTCAGCTTGATGTGCAAGAAGGGTTTGATTCCGGCCTATATCTGATTGTATCAGTTATATTCCAAAAGGAAGCATCAGGAGTGGGAATAGATCCCAGTTCTGAAAATGACTACATTGAAACAGGTTCCAAGGTGGAGCTGCCTTTCTGGCTTGCTCAAGAGCTACAATTGAGACAAGTAGTATCGATCAGCATTCCCTCTTGTTTTGACCAAAAAACTAGACTAGAGATTCAGGCTGATTGTGCCAGTGTGGATCTGAGGTCTCGGTGTCCATTCTTTTATGAATTTGGATGCAAGATAGCACCCGGGGTTGGTGATAGGACAATTGGGTTTCTGCTCTTGTCTGCATTTAAGAATAGGTACAAGGAACTCCTGACCAAGGCACATACTGCAGCATTTTCAGCTGCTACCAACCCTATGGCATCCTTTAAGAAGTGGCGAATTGGGGGACCTAGATTTCAGAAGGCCCCTCTTCTTGGAAGAAAGAGAAAATCAACCGAATAG 576 0.441 MDTNTSHKSKSHIQSSAITRPFHQSQLDVQEGFDSGLYLIVSVIFQKEASGVGIDPSSENDYIETGSKVELPFWLAQELQLRQVVSISIPSCFDQKTRLEIQADCASVDLRSRCPFFYEFGCKIAPGVGDRTIGFLLLSAFKNRYKELLTKAHTAAFSAATNPMASFKKWRIGGPRFQKAPLLGRKRKSTE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0029 191 Pfam GINS complex protein 69 156 IPR021151 -
Lele30g0029 191 Gene3D - 40 172 IPR038437 -
Lele30g0029 191 SUPERFAMILY PriA/YqbF domain 41 90 - -
Lele30g0029 191 SUPERFAMILY GINS helical bundle-like 89 171 IPR036224 -
Lele30g0029 191 PANTHER UNCHARACTERIZED 41 160 IPR010492 -
Lele30g0029 191 CDD GINS_A_psf3 85 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0029 Lele-ChrLele30 331519 335202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0029 41 190 Core DNA Replication Machinery Family AT3G55490 61.310 8.17e-71 211