Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0027 ATGAGCCTCAGAGCCGATAAAGAATGGGTCATGGAGTGCTTCAGTCTTGCTCATTTGCTCCATGTTTTGGTTTCATTAGTCTTGAAGTATGGCTCCCAATTTACTGTAGTTTACTTGGATGTTGAAAATGGGAAGGTTCAAGCAGCTAATTTTCCTTTTTGTACAATAGAGCCAAATGTAGGGATTGTTGCTGTTCCAGATCCTCGTCTCCATGTGCTTTCAGATCTCACTAAGTCTCAGAGAGCGGTCCCAGCATCTATAGAATTTGTAGATATTGCGGGGCTAGTCAAAGGTGCAAGTCAAGGAGAGGGGCTTGGTAACAAGTTTTTGTCCCATATTCGTGAAGTTGACTCTATACTTCAGACTGACATTGTTCATGTGAATGGGAAAGTTGATCCCGAGACTGATATCGATGTTATCAACCTGGAACTTGTTTTCTCTGACTTGGATCAGATTGACAAAAGATTGGAGAAACTAAAGAAGGGCAAGTCAAAAGATTCTCAATCTAAACTCAAGGAGGAAGCAGAGAAGACTGTACTAGAAAAGATTCGGGAAGCACTCATGGATGGAAAACCTGCACGCTCTGTGACCTTAACAGATTTTGAAAGGGATGCTGTAAAGCATCTCTGCTTACTCACCATGAAACCTGTAATATACGTGGCTAATGTTGCAGAAACTGATCTAGCTGATCCTTCAATCAATGAACATGTAAAGGAAGTCATGAATCTAGCATCTGAATTGCAATCAGGAATTGTGACAATTTCAGCGCAGGTTGAGGCAGAGCTTACTGAACTACCAACTGACGAAATGCAAGAATACTTGAAATCTCTTGGTGTTAGTGAAAGTCGTCTTGGCAATCTAATTAGAGCAACCTACAGCCTCTTGGGGCTGCGAACTTACTTTACTTCTGGTGAGAAGGAAACAAAGGCATGGACAATACTTGCAGGAATGACTGCACCTCAAGCTGCTGGAGTCATTCACTCTGACTTTGAGAAAGGATTTATTGGAGCAGAAACAAATGCCTTGGAATTTAACTTTTACTCATCACTCATCACCGATGTATGCTGCATGAGACAAGACAAGACTTGCTTTTCTGCATATTTATGCTACACTAATACCTTCGCTTTCGATTCAATTTTGAATTATGTGTCTTATGAAGATTTCGTTGCAGCTGGTTCACTTGCTGTAGCTAGAGAGAAAGGACTTCTCTGTAAATACACTTTCATCTTGGATGAGATTTCCTGTGATAAGCGTCAAACTTTTGATGATTACATGGCTTTGGGGGGTCAATATTGGGGTTGGGCATATCAATTTCTCTCAAATGATACTCTGAGATCTGAGGGTAAGGAGTACATTGTACAAGAAGGAGGTGTCATGTTGTTTCGTTTCAACGTATGA 1398 0.4099 MSLRADKEWVMECFSLAHLLHVLVSLVLKYGSQFTVVYLDVENGKVQAANFPFCTIEPNVGIVAVPDPRLHVLSDLTKSQRAVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQTDIVHVNGKVDPETDIDVINLELVFSDLDQIDKRLEKLKKGKSKDSQSKLKEEAEKTVLEKIREALMDGKPARSVTLTDFERDAVKHLCLLTMKPVIYVANVAETDLADPSINEHVKEVMNLASELQSGIVTISAQVEAELTELPTDEMQEYLKSLGVSESRLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIGAETNALEFNFYSSLITDVCCMRQDKTCFSAYLCYTNTFAFDSILNYVSYEDFVAAGSLAVAREKGLLCKYTFILDEISCDKRQTFDDYMALGGQYWGWAYQFLSNDTLRSEGKEYIVQEGGVMLFRFNV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0027 465 TIGRFAM TIGR00092: GTP-binding protein YchF 43 342 IPR004396 GO:0005524|GO:0005525|GO:0016887
Lele30g0027 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 319 IPR027417 -
Lele30g0027 465 Pfam 50S ribosome-binding GTPase 45 125 IPR006073 GO:0005525
Lele30g0027 465 Gene3D - 125 215 IPR023192 -
Lele30g0027 465 Gene3D - 43 296 IPR027417 -
Lele30g0027 465 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 43 274 IPR031167 GO:0005525
Lele30g0027 465 Gene3D - 67 341 IPR012675 -
Lele30g0027 465 PRINTS GTP1/OBG GTP-binding protein family signature 106 124 IPR006073 GO:0005525
Lele30g0027 465 PRINTS GTP1/OBG GTP-binding protein family signature 45 63 IPR006073 GO:0005525
Lele30g0027 465 PRINTS GTP1/OBG GTP-binding protein family signature 89 104 IPR006073 GO:0005525
Lele30g0027 465 PANTHER OBG GTPASE FAMILY 41 464 - -
Lele30g0027 465 Pfam Protein of unknown function (DUF933) 297 341 IPR013029 -
Lele30g0027 465 CDD YchF 43 295 IPR041706 -
Lele30g0027 465 FunFam Ribosome-binding ATPase YchF 125 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0027 Lele-ChrLele30 320502 324735 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0027 30 320502 324735 Lele32g1350 32 14477439 14481226 hybridization