Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0022 ATGAGCAATATAAGCATGGTGGAGGCGAAGTTGCCGCCAGGTTTCAGGTTCCATCCCAGAGATGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACACACTGTGTTGATTCCGATTCCACTCTCATGATCGACGTTGACCTCAACAAGTGTGAGCCTTGGGATATTCCAGAAAGGGCATGCGTGGGAGGGAAGGATTGGTACTTCTACACGCAGAGAGACAGGAAGTACGCGACGGGGGTGAGAACGAATAGAGCGACGGCGTCCGGATACTGGAAGGCCACCGGGAAGGACAGGGCTGTGCTTAGGAAGGCCAAAGTGGTTGGCATGAGAAAGACTTTGGTGTTCTATCAAGGAAGGGCTCCTAAAGGCAAAAAGACTGACTGGGTCATGCATGAGTTTCGCCTTCATTCTCCCCTCCCTCATCTCTCTCATCATTCTTTCCCCAAGGAAGACTGGGTGCTGTGTAGGGTATTCTACAAGAACAGAGAAGAAGAAAGTGGAAAAGCTGACATGGGAAGCTGCTATGACGACGCTGGCTCTTCATCTCTTCCTGAATTAATGGATTCTTACATCAGTTTTGATCATCCTTCTTCTGCAGCTCATCATCACCATCATCAATATGAGCAAGTGCCCTGCTTCTCCAATAATAACGCTTTGTTATTCCCTCCTCCTCCTCCTCCAACAAACCCTAACCCTAAACCTAGCAGCAATAATTACAACCACCATGATCACACTAACTTATTGGGTCCACCAAATGAAGTAGCAGCCGCAGGATTATTTCCTCATGACTCCAAGGTTCTCAATGCTTTGTTGACACAACTCACCAAGATGGGAACTCATGAAGGATCTCCTTACTTATCTCAAGCGGCAATGCCCAATTATTTATGGAATAATCACTGA 906 0.4691 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCVDSDSTLMIDVDLNKCEPWDIPERACVGGKDWYFYTQRDRKYATGVRTNRATASGYWKATGKDRAVLRKAKVVGMRKTLVFYQGRAPKGKKTDWVMHEFRLHSPLPHLSHHSFPKEDWVLCRVFYKNREEESGKADMGSCYDDAGSSSLPELMDSYISFDHPSSAAHHHHHQYEQVPCFSNNNALLFPPPPPPTNPNPKPSSNNYNHHDHTNLLGPPNEVAAAGLFPHDSKVLNALLTQLTKMGTHEGSPYLSQAAMPNYLWNNH 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0022 301 SUPERFAMILY NAC domain 2 163 IPR036093 GO:0003677|GO:0006355
Lele30g0022 301 MobiDBLite consensus disorder prediction 220 247 - -
Lele30g0022 301 ProSiteProfiles NAC domain profile. 11 162 IPR003441 GO:0003677|GO:0006355
Lele30g0022 301 MobiDBLite consensus disorder prediction 220 235 - -
Lele30g0022 301 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Lele30g0022 301 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
Lele30g0022 301 FunFam NAC domain-containing protein 100-like 20 166 - -
Lele30g0022 301 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0022 Lele-ChrLele30 283369 286687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0022 2 299 NAC Transcription Factor Family AT1G56010 54.518 4.59e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele30g0022 NAM 4.5e-37 No_clan