Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0016 ATGAGCAGTCTTCGGGATAATTATTTGGAGAGTACCATATCGAGACTTGAAACAGAGCAGAATCCGTACTACATTACCGTTATGGGAGGCCCATCAACAATGGTGGAGATTGTCATGTCTCTGTCACCATCTCTTTTTGTCCTTACCATCTCGTTAGAGAGGAATTTCCTCTTCCAAAAGGGGTTTTACTTGATGATGGTGATTTGTTTTGGTGTTGCCCAAGTAAGTTCTATTAATGATGATGGTTCGGTTCTTTTGGAGTTTAAAAAATTTCTCTCTGACCCACAAAAAAGTCTTCATGATTGGAATTCTTCTGATATGACCCCATGCAATTGGACTGGTGTGCGTTGCGATGATTCAGTGGTAACTTCTATAAATCTTCATCACCTTAATCTATCTGGCTCTTTATCTCCAATCATCTGTAACCTCCCTCATCTGGCTGAGTTGAATTTGTCAAATAATTTCATTTCGGGCCCTATTCCTGTTGATTTTGTTGATTGTAGTAGTCTAGAAATATTAGACCTTTGTACAAACAAATTTCATGGAGAGCTTCAGAAACCTTTGTGCCAAATTACCTCACTAAGAAAGCTTTATGTGTGTGAAAATTTTATGTATGGTGAAGTGCCAAAAGAGATTGGGAATTTGAAGTCCCTTGAAGAGCTAGTCATTTATAGCAATAATTTAACTGGAAGAATTCCTATGTCAATAAGGCAACTGAAGCAACTAAAAATCATCAAGGCTGGCTTCAATAGTCTCTCAGGCCCAGTACCTGCAGAAATTAGTGAGTGTGAGAGCTTGGAGTTGTTAGGATTGGCACAGAATCAGCTAGAAGGTTCAATCCCAAGGGAGCTTCAGAAGCTTCAGAACCTTACTTCTATACTTGTGTACCAAAACCTTTTATCTGGGGAGATTCCACCAGAAATTGGAAATATCAGTAGGTTGGAATTACTTGCTTTGCATCAAAATTTGTTCAGCGGAGCTATTCCGAAGGAGCTGGGGAAGTTGTCTCACTTACAAAGGTTGTATCTTTACACCAACCACTTGAATGGGACTATTCCTCCGGAGCTAGGGAACCTTACAAGTGCTGTGGAGATTGATCTTTCTGAGAACCTCTTGAGTGGTTTTATTCCTAGAGAGTTGGGGCAGATCTCTAATCTTGGATTGCTTCATCTATTTGAAAACCTTCTGCAGGGAGAAATCCCTAGGGAACTTGGGCAGTTATGGCTACTCGATACTTTAGATTTGTCAATAAATAACTTAACAGGTACAATTCCATTAGGGTTTCAGAATCTTACATACATGACGGATTTGCAGCTGTTTGACAATCAACTTGAGGGTAAGATTCCTCCTGGTCTTGGAGCTAGAAGCAACTTCAGTGTCCTTGATTTATCTGCTAACAATCTCATCGGTATGATACCTGCCCATCTTTGCAAATATCAGAAACTGAGATTTTTAAGCCTTGGGTCAAATAGGTTGTCTGGAAATATTCCATATGATCTGAAAACTTGCAAGTTACTTGAGCAGCTTATGCTGGGGAACAACCAGCTGACAGGATGCCTCCCTGTTGAATTAAATGAACTTCATAATCTTTTTGCACTTGAACTTCAGCAGAATTGGTTCTCTGGGCTAATAAACCCAGGGATAGGTCAACTCCAGAGTTTGATGAGGCTTCTCTTGTCAGATAATCATTTTTTTGGGCATCTACCTCCTGAGATTGGAAAATTGGCACAACTTGTCTCATTCAATGTTTCCTCTAATCTTCTAAGTGGAAGTATCCCTAATGAGTTGGGAAACTGTGTAAAACTGCAGAGGCTTGATCTTAGCAGGAATCAGTTCACTGGCGCCCTTCCAGATGAAATTGGCAAGCTGGTGAATTTGGAATTGTTGAAACTTTCTGATAATAAATTCTCAGGTGCAATACCAAGCGCTTTAGGGGATCTTACTCGACTCACAGAGCTGGAACTTGGCGGTAACTTGTTTTCAGGTAGCATTCCTTTTCATTTGGGAGGACTTGCTGCTCTTCAGATTGCCCTTAATATGAGCCATAACAAACTATCTGGTGTAATTCCTGACAGCTTGGGGAGCTTACTGATGTTGGAATTCCTTTACTTAAATGACAATGAGCTTGTGGGTGAAATTCCCAACTCAATAGGTGACTTGCCCAGCCTTCTGGTTTGCAATGTTTCTAACAATAATTTGACTGGAACTATTCCAAACACCCCTGCATTTCAAAAGATGGATTTCACAAATTTCGCCGGAAACAGTGGATTGTGTCAAATTGGTTCCTATTATTGTCGTTCTTCCAAATCTCCCCCTTCTACTTCGAAACAAAGTTGGACTAGAGATGGTTATTCCAGGGCGAAGATATTGTGTATAGTTTCGGGTGTAATTGGATTGGTTTCTCTTACATTCATTGTTTGTATATGTTGGGCTATGAAGCGCAAGAGTCCTACTTTGGTCTCCTTAGAAAGGCAAACAAGGCCTCATGTCCTAAATAGCTATTATTTTCCGAAAGAAGGTTTCACGTACCAGGATCTCTTGGAAGCCACTGGTAATTTTTCAGAAGCTGCAATTATAGGAAATGGAGCTTGTGGCTCTGTCTACAAGGCTATTATGGCTGATGGTGAGGTGATTGCTGTCAAAAAGCTGAATTCTTGTGGAGAAAGAGCATATGTTGACAGAAGCTTTCTTGCAGAGATTTCAACCCTTGGAAAGATCAGGCACAGGAATATTGTGAAGTTGTATGGATTTTGTTATCATGAGAATTCTAGGATTCTCTTATATGAGTACATGGAAAATGGCAGCCTCGGAGAACAACTCCATTCAAATCCAGAATCATGTCCACTGGATTGGAATTGTCGATATAACATTGCTCTCGGGGCTGCGGAAGGCTTGTGCTATCTTCATTATGACTGCAAGCCTCAAATCATTCACCGCGATATAAAGTCAAACAACATACTACTTGATGAAAATTTTCAGGCACGTGTTGGAGACTTTGGCTTGGCAAAGTTGATTGACTTTTCATTTTCAAAATCCATGTCTGCTGTGGCTGGTTCATATGGCTACATTGCTCCAGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGCCTTGGAGTAGTTTTGTTGGAACTAGTGACCGGCCGTTCACCGGTTCAACCGCTGGAACAGGGCGGTGATTTGGTGACTTGGGTGAGAAGATCAATTCAAGCAGCAGTACCAACATTGGAACTATTCGACAAGCGACTGAATCTGAGTGAACAAAGAACAATTGAAGAGATGTCTCTTATTCTCAAGATTGCATTGTTCTGCACCAGTGTGTCTCCTCTTAAGAGGCCAACAATGAAAGAGGTCATTGCAATGTTGATCGATGCTAGAAAGTATGCTAGCAATTCTCCTTCTATCCCTACATCAGAATCCCCACATGATGATGCAGCATCTTCCAAAGGTTAA 3465 0.4081 MSSLRDNYLESTISRLETEQNPYYITVMGGPSTMVEIVMSLSPSLFVLTISLERNFLFQKGFYLMMVICFGVAQVSSINDDGSVLLEFKKFLSDPQKSLHDWNSSDMTPCNWTGVRCDDSVVTSINLHHLNLSGSLSPIICNLPHLAELNLSNNFISGPIPVDFVDCSSLEILDLCTNKFHGELQKPLCQITSLRKLYVCENFMYGEVPKEIGNLKSLEELVIYSNNLTGRIPMSIRQLKQLKIIKAGFNSLSGPVPAEISECESLELLGLAQNQLEGSIPRELQKLQNLTSILVYQNLLSGEIPPEIGNISRLELLALHQNLFSGAIPKELGKLSHLQRLYLYTNHLNGTIPPELGNLTSAVEIDLSENLLSGFIPRELGQISNLGLLHLFENLLQGEIPRELGQLWLLDTLDLSINNLTGTIPLGFQNLTYMTDLQLFDNQLEGKIPPGLGARSNFSVLDLSANNLIGMIPAHLCKYQKLRFLSLGSNRLSGNIPYDLKTCKLLEQLMLGNNQLTGCLPVELNELHNLFALELQQNWFSGLINPGIGQLQSLMRLLLSDNHFFGHLPPEIGKLAQLVSFNVSSNLLSGSIPNELGNCVKLQRLDLSRNQFTGALPDEIGKLVNLELLKLSDNKFSGAIPSALGDLTRLTELELGGNLFSGSIPFHLGGLAALQIALNMSHNKLSGVIPDSLGSLLMLEFLYLNDNELVGEIPNSIGDLPSLLVCNVSNNNLTGTIPNTPAFQKMDFTNFAGNSGLCQIGSYYCRSSKSPPSTSKQSWTRDGYSRAKILCIVSGVIGLVSLTFIVCICWAMKRKSPTLVSLERQTRPHVLNSYYFPKEGFTYQDLLEATGNFSEAAIIGNGACGSVYKAIMADGEVIAVKKLNSCGERAYVDRSFLAEISTLGKIRHRNIVKLYGFCYHENSRILLYEYMENGSLGEQLHSNPESCPLDWNCRYNIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDENFQARVGDFGLAKLIDFSFSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSLGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQAAVPTLELFDKRLNLSEQRTIEEMSLILKIALFCTSVSPLKRPTMKEVIAMLIDARKYASNSPSIPTSESPHDDAASSKG 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0016 1154 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 818 930 - -
Lele30g0016 1154 SUPERFAMILY L domain-like 79 349 - -
Lele30g0016 1154 Gene3D Ribonuclease Inhibitor 229 331 IPR032675 -
Lele30g0016 1154 Gene3D Ribonuclease Inhibitor 334 501 IPR032675 -
Lele30g0016 1154 Gene3D Ribonuclease Inhibitor 502 768 IPR032675 -
Lele30g0016 1154 FunFam Predicted protein 234 329 - -
Lele30g0016 1154 Gene3D Phosphorylase Kinase; domain 1 817 930 - -
Lele30g0016 1154 ProSiteProfiles Protein kinase domain profile. 853 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0016 1154 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 931 1143 - -
Lele30g0016 1154 SMART LRR_typ_2 551 575 IPR003591 -
Lele30g0016 1154 SMART LRR_typ_2 335 359 IPR003591 -
Lele30g0016 1154 SMART LRR_typ_2 647 671 IPR003591 -
Lele30g0016 1154 SMART LRR_typ_2 696 720 IPR003591 -
Lele30g0016 1154 SMART LRR_typ_2 143 167 IPR003591 -
Lele30g0016 1154 SMART LRR_typ_2 623 646 IPR003591 -
Lele30g0016 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 976 988 IPR008271 GO:0004672|GO:0006468
Lele30g0016 1154 Pfam Leucine rich repeat N-terminal domain 79 118 IPR013210 -
Lele30g0016 1154 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515
Lele30g0016 1154 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 77 233 - -
Lele30g0016 1154 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 330 424 - -
Lele30g0016 1154 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 455 769 - -
Lele30g0016 1154 SMART serkin_6 853 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0016 1154 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 527 1127 - -
Lele30g0016 1154 Pfam Protein kinase domain 855 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0016 1154 SUPERFAMILY Protein kinase-like (PK-like) 828 1126 IPR011009 -
Lele30g0016 1154 Gene3D Transferase(Phosphotransferase) domain 1 931 1143 - -
Lele30g0016 1154 MobiDBLite consensus disorder prediction 1134 1154 - -
Lele30g0016 1154 SUPERFAMILY RNI-like 412 739 - -
Lele30g0016 1154 Gene3D Ribonuclease Inhibitor 77 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0016 Lele-ChrLele30 247226 251238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0016 72 1133 Receptor kinase-like Gene Family AT1G73080 38.052 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele30g0016 Pkinase 2.1e-48 CL0016