Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0011 ATGGTATCACCTGGATCTGGAAACACAATCATCAGATATCCTATGACTCAGAACGCTGACATGAGACGTGAATCGGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGAGCTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGTGGGGAGTAACCAATATTCTATGGATGAAGGGGATATATCTTCTCTTAGGAGCAGGGCTCATGAAAGCATTCAGCATGCTGACATGCTCAGCGTCAATTCCAGTCATGAGTCTCTATCTGAAAATGGGGATAGTAAGCAGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGCACCAAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCTATTGATGCTAGTTTAGCAGATGGTAGCCATCCCAAGAATGCAGACAGAAGAAATGCATCTTGTAGTTCGGCTTCACCTAATATCTTAGGGGCAGAAGGATCTGGAAGTGCACAATCTTTTGGCATGTCTGGCTTACCTGAGATTCCTCCTTCTAAAGATGTGGATACTGGTGAGAGCTCACCTAAGCTACAAAGCCAGGATGCAAAGTCTCAAGGTGTTAAGTCTCATTCGACTAGTCCAAGGTTAATGGATGTGGAACGAGATGCACATTCTCTTTTTCCAGAAAAATCTGAATGCTTCACAGAAAATACTGTTTCATCATTGAGAAAAGTGATGGCAACTTTGGTTGTTTCTGGTGAGAAACCTCTTGCTGTTAAGGATAATCTTATTGATGGTAGCTCCATGGCTTCAGTAAAAATATATTCCAAGTCAGAAGCAGATGCTGTCAATGAAGTTGGCGGTGCTTCATATGAAGCTCGTAATCTTGCAGTCCAAGATGAGCAGCATAAAGCTGAGCAACCACTTGAATCACCTGGCATGGAGGAGACTCGATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGGGAAGATCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCTGAACACACCTATTGCATGCGAGAAATGCTTCAGAAGGTCCCTGAAGGAGACTGGCTATGTGAAGAATGCAAATATGCAGAGACAGAAAATCAGAGGCTGGATGTTGAAGAAAGAAAAATTCCAAAAGTTAGTTCAACATCAGAACATGCTGGCAAGAGGCTGTCTGAGAATATAGAACTGGCTCCTGTACCAAAAAGGCAGACTCTTGAATCAAGCTCAGGTTCACCTAAGTCATCAAGCCCCAAGAAAATTGTTGCACTTTCTCAAGAATCTTCATTAAAGAACTTTGATAAAGTTAAAGTGAAGCCTGATAATCAAATGCCTATTCGAAATTACTCTGGAAGTGATAACATGGAAACTGTTTGTTCTCCTTCTGCTGGCCCTCGGGGTCTACTTCGAAAGGGTATGCTGTTGAAATCTAATTCATTCAACGCATTAAATTCAAAGCCTCGAGTCAAACCTGTTGATGAAGTTGTTCCCCAAAAGCGGAAGGGGCCTGGTGGAAATACTTCTAAGAATGTGGAGACACCTGCCCGGGTGATAGGCAAATCTGTGTCATTTAAATCCATGAATTTGGGTCGTTCAAGTACAACTGCTTCAAAAGTTAAATTGCTTTCATCAAAATCGGTAGCTGCTCAGGATTTGAAAGGAACAGGACTTGCAAAAGACTCCAGTGCATTTGACAGGAAAAGTCTCTCTAGGGTTGATCGACCGGTGGTTTGCTCAGCAATGGCTACCTCTGTTGTTTCAACGCCCAAAGGTGATCAGAAGAGCACAACTCTTAGTGAAACTATTAAACCTTCATCAGTCAGCAACAACCGAGACTTGAAGGTGAATCAAGATGGAAAATTAAGTACGTTATCAAAGTCTATTAGTAATGTAAGCCGGAAAGGTGTAGAACCTCAAGTCAGTTCAGGGAGAATATATACCAGTGGTGATGAATCTGTACAAGATTTGCAGCCTCGAGTACAAGAAACAGCCAATCCAGTTGAGAAAACAAGAGACAGCTCTAGTGATCGTGTGAGGACAGATGCCATTGCTACTCCCAAAGGATGCTGTCAAAAGGGTAAGGAGTTTGGTCATACTACAGAATGTTGCACAATTGGTAAAACCCAAGAATCTGGTAATGAAGTTTCTGTTACTACCACAAGTAGTTCTATAGAGGAGATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGGATGCCTGAAATATACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCACAGACTTGAAATGTGAAGCAACAGCTCAAGACCAAGTATTGGTTTCTGGCACCCCAAATAATAGTATATCTGCTGAAGAAATTCACGATAGGCAGGACATTATTGAGAGCTCCGCTGCTGCATCTTCAAAATGTTCATCTGATGAAAAGAAGCTTAACTTAAGCCGAAGTGATTCTTGTTCTCAATTAGGAAACTTAAGTGTTGTTGGTCCTTCCATTGGAAAGATTGCCGTGAAAGACTTTCCTGATCAACCTCTGGCAATCTCACGTGCTCTTTCAAAGATGGCTGTTCCAGAATATGAATACATCTGGAAGGGTATCTTTGAGCTGCATAGGAGCGGAGAGCCTCCTGACTTATGTCCTGGAATTCAAGCACATTTGTCAACTTGTGCTTCTCCAAATGTTCTTGAAGTGGTGAACAAATTACCATCCAAAATTTCTCTCAGTGAAGTTCCTCGCTCAAGCACATGGCCTTCACAATTTCATCAAGGTGGTGCTAAAGAAAATAATATTGCACTTTACTTCTTTGCCCAAGATATTGAAAGTCATGAGAAACACTATGGAGCTCTATTGGATCACATGATGAGGAATGATTTAGCACTTAAAGGAATCTTTGATGGTGTTGAACTGCTCATATTCCCTTCCAATCAACTTTCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTCAAGGGGAGAAGGATAAATCATTCAGATTCTGCAGAAAAGACTTGTATTCCTAGCTCGAATATGATGCCAGTTAAAAAGGATTTTCCCACTGCCATTATGACGTTGTCTAAGATCCACTGCTCACCAAAGCGATTGGATGAAGAGTCAATCGCTGGTGATAGGACATGTATGGTTCTCCCAACTACTTCCCTAGACCAGAATTGTGCTACAGTAAGTAGGAATGTTGATGTCAAAGAATCTAATCTTGACCAGACACACTCAGAGGAACAAGATGGTAAAATTGACACGAAACCTACATCAAGCAGTCTGGCTAGTGGTGCACAGTTCTGTCAAGAGTTGAAATTTACTGGTTCATCTATGAAAGGTAGCCCCCTGGAACATGAACCAGAGAAAGAGTCTGAACCTTCTCCTGGAGCAGTGGGAACAAATGTTACTGGTAGGAATGTGGAAACAAAAGTTGATCGAGATATATCTGTTAAAGAAGAGAAGCCTTTGCCTTCAGGGATTCCTTCTCTTGACTCTCAGGAGATATGTGTTGCAAGTACTGCCAGTGAAGACAAGTTTTCTGCGAGAATGGCAGGTGATAGTAATCAACAAAGGCATAAAAAGCAACAGAAAGATGATCAGTATAATGACTTTGAGACGGCTTTTCAGGGAGAGCTAACTGTAGAAGGGGTGAAGCTTCAGCAGTCTAGTGATAGAAGGTTTCAGCATATTGATCTAATGGACTCTGCTATGCAGACTTCTGCAGTTACATGCAAGAGACTTTGGAGCGAGGCAGATGTCAAATTGGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACAGATGACTGTGGAGCTTATGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATAGGAACACTTTTGCATCACATGCAAATGATCTTGGAACCTGTTCAATTAAGGACAAAGGATGTTATGAAATCTGTGATGAGAAAATCATCCTGGAAGACTTGGGAACAATGGAAAGAACTTTCTTTCCTGTTGATGCACACAATGTAAATGATTCTCATTTGGGTCCAAATAGCTCGTCGTTGAAAGGGCCTCATGTGTATGATGATCAATTTCATGATGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCACCGCATAAGGGAATGCTGCCTTTCTTTGTTGGGGAAATAGAGAAGAAGCATTGTTGGGAAAATCCTCCAGATTGCTTGGCAGATGAGCAAGAGGATGATGGGGTTGCTGCATCTCTCTCTTTGTCATTATCGTTTCCATCTTCAAACAAAGAACGCGTTAAAACTGTTTCAAAAACAGAGCAGCTTTTGCCTGATGGACGCCATGTGAATACTTCGTTGCTCCTTTTTGGGAGATTTGCGGACAAATAA 4434 0.4152 MVSPGSGNTIIRYPMTQNADMRRESGTCNVCSAPCSSCMHFNRACMGSKVEFSDENCRLVGSNQYSMDEGDISSLRSRAHESIQHADMLSVNSSHESLSENGDSKQTLSSKCQESKHQEGLDDNTSCISRAIDASLADGSHPKNADRRNASCSSASPNILGAEGSGSAQSFGMSGLPEIPPSKDVDTGESSPKLQSQDAKSQGVKSHSTSPRLMDVERDAHSLFPEKSECFTENTVSSLRKVMATLVVSGEKPLAVKDNLIDGSSMASVKIYSKSEADAVNEVGGASYEARNLAVQDEQHKAEQPLESPGMEETRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKYAETENQRLDVEERKIPKVSSTSEHAGKRLSENIELAPVPKRQTLESSSGSPKSSSPKKIVALSQESSLKNFDKVKVKPDNQMPIRNYSGSDNMETVCSPSAGPRGLLRKGMLLKSNSFNALNSKPRVKPVDEVVPQKRKGPGGNTSKNVETPARVIGKSVSFKSMNLGRSSTTASKVKLLSSKSVAAQDLKGTGLAKDSSAFDRKSLSRVDRPVVCSAMATSVVSTPKGDQKSTTLSETIKPSSVSNNRDLKVNQDGKLSTLSKSISNVSRKGVEPQVSSGRIYTSGDESVQDLQPRVQETANPVEKTRDSSSDRVRTDAIATPKGCCQKGKEFGHTTECCTIGKTQESGNEVSVTTTSSSIEEMHKSDNVKAALQAALLRMPEIYKKKEVANQMDELGTDLKCEATAQDQVLVSGTPNNSISAEEIHDRQDIIESSAAASSKCSSDEKKLNLSRSDSCSQLGNLSVVGPSIGKIAVKDFPDQPLAISRALSKMAVPEYEYIWKGIFELHRSGEPPDLCPGIQAHLSTCASPNVLEVVNKLPSKISLSEVPRSSTWPSQFHQGGAKENNIALYFFAQDIESHEKHYGALLDHMMRNDLALKGIFDGVELLIFPSNQLSEKSQRWNMLFFLWGVFKGRRINHSDSAEKTCIPSSNMMPVKKDFPTAIMTLSKIHCSPKRLDEESIAGDRTCMVLPTTSLDQNCATVSRNVDVKESNLDQTHSEEQDGKIDTKPTSSSLASGAQFCQELKFTGSSMKGSPLEHEPEKESEPSPGAVGTNVTGRNVETKVDRDISVKEEKPLPSGIPSLDSQEICVASTASEDKFSARMAGDSNQQRHKKQQKDDQYNDFETAFQGELTVEGVKLQQSSDRRFQHIDLMDSAMQTSAVTCKRLWSEADVKLEDGENSSKKLKTDDCGAYGCSSSGGRDSYRNTFASHANDLGTCSIKDKGCYEICDEKIILEDLGTMERTFFPVDAHNVNDSHLGPNSSSLKGPHVYDDQFHDEIPNLELALGGEMKPPHKGMLPFFVGEIEKKHCWENPPDCLADEQEDDGVAASLSLSLSFPSSNKERVKTVSKTEQLLPDGRHVNTSLLLFGRFADK 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0011 1477 MobiDBLite consensus disorder prediction 297 313 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 392 444 - -
Lele30g0011 1477 ProSiteProfiles Zinc finger PHD-type profile. 330 381 IPR019787 -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 1131 1165 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 421 444 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 1093 1109 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 297 325 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 647 697 - -
Lele30g0011 1477 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 394 IPR013083 -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 1093 1118 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 647 682 - -
Lele30g0011 1477 PANTHER - 330 1060 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 91 124 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 188 209 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 137 213 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 91 109 - -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 605 631 - -
Lele30g0011 1477 SUPERFAMILY FYVE/PHD zinc finger 319 381 IPR011011 -
Lele30g0011 1477 MobiDBLite consensus disorder prediction 146 172 - -
Lele30g0011 1477 SMART PHD_3 332 379 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0011 Lele-ChrLele30 183571 192552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0011 329 415 C2H2 Transcription Factor Family AT3G01460 29.885 1.85e-06 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0011 30 183571 192552 Lele30g0011 30 183571 192552 ECH
Lele30g0011 30 183571 192552 Lele31g0011 31 172245 196613 hybridization