Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0009 ATGGGGATCCCTAGGTCACCGTTCACAGTCTCTCAGTGGCAGGAACTGGAGCACCAGGCGTTGATTTTCAAGTACATGGTGGCCGGTCTTCCCTTGCCTCCCGATCTTGTCCTTCCCATTCAGAAGAGCTTCGAGTCCATTTCTCAAAGGTTCTTTCACCATCCCACCATGAGTTATCGTTCCTTTTATGGGAAGGTGGACCCAGAGCCAGGACGTTGCAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGAGTCAAAATACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCATACCATGACACAGTCATCATCCACTGTGACATCACTGACTGTCACAGGTGGCAGCAGTAGAAATGAAAACTTCCAGAACCGTTCCATAAATGCCTTTACTAATCCCCAAGGTACTGGTTCTGGAACCTACCAGCCCCAGTATAATCTGGATTCCATTCCATATGGGATCCCAAGTAGAGAATACAGGTATCTTCAAGGGCTTAAATCTGAGGGTGGTGAGCATAGTTTCATTTCCGAAGCCCGGGGGAGCAACAGGTTTGTTCAGATGGAATCACCGATGGAAAACACATGGCACTTGATGACAACCAGAGTTGCCTCAAATGCTACCTCAAAATCAAACAACAGCACCGTGCTGCAGAGTGATTATCCTCAGCACTCATTTCTATCTGGTGGGTATGCATCCGCGGAGCCTGTGAAGCTGGAAGGCAGCCAGTCTCTTCGACCTTTATTTGATGAATGGCCTAGATGTCGGGAATCATGGTCTGGACTGGAGGATGAGAGATCTAAGGAGGTAGCTTTCTATACAACACAACTCTCAATATCAATCCCCATGTCATCCTCCGACTTCTCTGCAACTAGCTCTCAATCTCCAAATGGTGAGATTTAG 942 0.4851 MGIPRSPFTVSQWQELEHQALIFKYMVAGLPLPPDLVLPIQKSFESISQRFFHHPTMSYRSFYGKVDPEPGRCRRTDGKKWRCSKEAYPESKYCERHMHRGRNRSRKPVESHTMTQSSSTVTSLTVTGGSSRNENFQNRSINAFTNPQGTGSGTYQPQYNLDSIPYGIPSREYRYLQGLKSEGGEHSFISEARGSNRFVQMESPMENTWHLMTTRVASNATSKSNNSTVLQSDYPQHSFLSGGYASAEPVKLEGSQSLRPLFDEWPRCRESWSGLEDERSKEVAFYTTQLSISIPMSSSDFSATSSQSPNGEI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0009 313 MobiDBLite consensus disorder prediction 98 136 - -
Lele30g0009 313 Pfam QLQ 7 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele30g0009 313 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
Lele30g0009 313 PANTHER GROWTH-REGULATING FACTOR 5 7 300 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele30g0009 313 SMART QLQ_2 6 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele30g0009 313 Pfam WRC 68 110 IPR014977 -
Lele30g0009 313 ProSiteProfiles QLQ domain profile. 7 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele30g0009 313 MobiDBLite consensus disorder prediction 110 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0009 Lele-ChrLele30 160333 163881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0009 3 110 GRF Transcription Factor Family AT3G13960 60.177 6.81e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele30g0009 WRC 6.5e-21 No_clan