Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1587 ATGGATGGGGTCAGCCCTGATAATGAAGCGGAACAGTCTCAGTGCAGAGACTTGGGCGTTGCATCCTCATCTTCAGCATCGACGGGGTTAGGATGGAGGCCCAGCCACCTTGGGTTTACTCCATATATATGCACGGGTGAAACTTCGGATAATTCCCAAACTCTGCGTGTGGTTGTGAGGAAATCCCTGCTGGCAAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCGCAGTTCAAATATTCTGAAGAGCTAAATCCAAAAAGATATTTGACCAGCCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTTAACTCAGATCTTATTCTGACAGTGAACTTTGTCTTGGTCAATTTAGAGAGAAATAGAAGATATCTTGTCAAAGATGTCCTTGGCCACGGGACATTCGGACAAGTGGCTAAATGTTGGGTTTCAGATACTAACAGCTATGTTGCTGTGAAAATCATCAAAAACCAACCTGCATACTATCAACAGGCATTGGTTGAAGTATCTATTTTGAACACGGTATTAAACAAAAAGTATGATCCTGAGGACAAGCATCACATTGTTCGTATATATGATTACTTTGTCTATCAACGGCATTTGTGCATATGCTTCGAACTTTTGGACACAAACTTGTATGAGCTTATCAAGTTGAACCATTTTAGGGGATTATCTCTGAGTATTGTTCAGTTGTTCTCTAAGCAGATATTGCATGGACTGGCTCTATTAAAAGATGCTGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTCTATGTACAAGGGTGAAGCCAGCAGAAGTCAAGATTATTGACTTTGGATCAGCATGCATGGAAGATCGCACTGTCTACTCCTATATTCAGAGTCGTTATTATAGATCTCCCGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCCGAATTGTTTCTTGGATTACCATTATTTCCGGGTGCTTCTGAATTCGACCTTTTGAGGCGGATGATTGAAATACTTGGAGGACAACCGCCTGATTATGTACTGAGGGAGGCCAAAAACACTAGTAAGTTTTTTAAGTGTATCGGGAGTCTCCAGAATGGAGAGAACAGTGATATTCCGACCAATGGAAGAAGTTCTTATCAAGCATTGACTGAGGAAGAATATGAAGCTAGAGAGTTGAAGAAACCATCAATTGGGAAAGAGTATTTCAATCATATGAACCTGGAAGCAATTGTTACTAACTATCCCTATAGAAAAAACTTGCCAAAGGAAGATATTCTGAAAGAGAGTCAAATACGATTGGCATTGATTGATTTTTTGAGAGGGCTAGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAGGCACCCTTTTGTGACAGGGGAACCTTTTACTCATCCTTATGAGCCTCCTCCAGAGACCCCTCGTGTGCCGGTTGTTCAAGCTGTCAAAGTAGATCATCACCCTGGTGGAGGGCACTGGTTTGCTGCTGGTCTGTCACCTAATTTTCCTTGCAAAAGTAGGCCGTCACTATATAGCAGCTTGCATTTCCAGATGGTGCAATATCCACCTGCTAACAGCTACGGCAGTGTAGGAAGCCATGGTAGCTATAATGATAGTGTTGGGCTTGGAAGTAGCTACGGCAGTTATGGAGAAAGCAGTAATATGTTTGCATACTATTCGCCTGTTGGGCCATCTGGAATTCATTTGATTGGTCATGGGAGTACGTCAATGCTTGGAAATAGTCCTGATGCGAGGAGAAGAGTTATTCAATACCCGCCGGGGAATGGTCGAGGCATAAGCCCATCTGCTGGAACTTTCACTCATCTGCCCCTTGGTGCCAGTCCCTCACAATATACTCCTCCAAGTTCCTATGCACAAGTTTCAGCAAGCTCTCCAGGACACTATGGACCTACTTCTCCTGCAAGAGGCACTTCTCATGGATCACCATTAGGGAAGACATCTACAGTTAGCCAGTTTAACAGAAGAAAAAATTGGGGATGTTCTGGAAGTCCTCAAACTCAAGATATAACATTTTCTCCACACTGGCAAGGTCAATGTTCTGACAGCTCCATCCATGGTGAAGGAACAGCTCAAGTTCTTAGCAGCTCGCCATCTTATCTGCAATCACATACTGATGCTGCGAGCTGGAAGCAGCGAGGAGGTGGAGCTAATCAGAAAATGGCATGCTTGTTCATACAGAGTTCTAATTCAAGCTTGCAATCAACAGAATTGGGACATGACAACCCAGAGTCTTGCTTATCATTGCCTGATCCTGGTGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGAGGATAGTTCAGATGGAAGCTGCTTGGCAACTGAGTTTGGCAGAAGTATGAATATTGGTTCCACGGAACCATGGGTTGGATTTGGTAGGGTCAACCATACCTCCAGCACAAGCTCTCCTATATCCATTCAGAGACAAAATGTACCGGTTCAAGCATATTCTAATGTAGAGATGGATAGCCCTCCAGCTCATGATATGCAAGCTGGATACATGCGCTCCATGTCTAAACCTTTTCATCTCATACCTCGTATTTTGCAAAATTCTCCTAGCCGATTTGGTCTGCAACCTGTCCAAAGATTTGCCCATGGCAGACCCACTCAGTTCAGTGAGTGGAATCAAATTAAGGCCCAGGCTCCTCCTTCCAGTTTTGGCAGTGGAGGCCCCCGTTCTCCAAGAAATAGCTCGTTTGCCAATAGTATGACATGGGGGCGTAGAGTTAATCCTCCTGTCTCAAACATTCCGCCTGCATCCTGTGCAAGGAAAGACTATGCAAGGATAGACTAG 2865 0.437 MDGVSPDNEAEQSQCRDLGVASSSSASTGLGWRPSHLGFTPYICTGETSDNSQTLRVVVRKSLLARLTKEIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNFVLVNLERNRRYLVKDVLGHGTFGQVAKCWVSDTNSYVAVKIIKNQPAYYQQALVEVSILNTVLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTRVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLREAKNTSKFFKCIGSLQNGENSDIPTNGRSSYQALTEEEYEARELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDILKESQIRLALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPPETPRVPVVQAVKVDHHPGGGHWFAAGLSPNFPCKSRPSLYSSLHFQMVQYPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPVGPSGIHLIGHGSTSMLGNSPDARRRVIQYPPGNGRGISPSAGTFTHLPLGASPSQYTPPSSYAQVSASSPGHYGPTSPARGTSHGSPLGKTSTVSQFNRRKNWGCSGSPQTQDITFSPHWQGQCSDSSIHGEGTAQVLSSSPSYLQSHTDAASWKQRGGGANQKMACLFIQSSNSSLQSTELGHDNPESCLSLPDPGDWDPNYSDELLLQEDSSDGSCLATEFGRSMNIGSTEPWVGFGRVNHTSSTSSPISIQRQNVPVQAYSNVEMDSPPAHDMQAGYMRSMSKPFHLIPRILQNSPSRFGLQPVQRFAHGRPTQFSEWNQIKAQAPPSSFGSGGPRSPRNSSFANSMTWGRRVNPPVSNIPPASCARKDYARID 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1587 954 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 93 210 - -
Lele29g1587 954 MobiDBLite consensus disorder prediction 1 28 - -
Lele29g1587 954 SMART serkin_6 130 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1587 954 MobiDBLite consensus disorder prediction 626 670 - -
Lele29g1587 954 MobiDBLite consensus disorder prediction 904 933 - -
Lele29g1587 954 Gene3D Phosphorylase Kinase; domain 1 95 211 - -
Lele29g1587 954 Gene3D Transferase(Phosphotransferase) domain 1 212 474 - -
Lele29g1587 954 CDD PKc_YAK1 130 473 - -
Lele29g1587 954 ProSiteProfiles Protein kinase domain profile. 130 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1587 954 PANTHER DUAL SPECIFICITY PROTEIN KINASE 61 476 - -
Lele29g1587 954 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Lele29g1587 954 MobiDBLite consensus disorder prediction 754 782 - -
Lele29g1587 954 MobiDBLite consensus disorder prediction 7 28 - -
Lele29g1587 954 MobiDBLite consensus disorder prediction 700 719 - -
Lele29g1587 954 MobiDBLite consensus disorder prediction 904 954 - -
Lele29g1587 954 SUPERFAMILY Protein kinase-like (PK-like) 125 495 IPR011009 -
Lele29g1587 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Lele29g1587 954 Pfam Protein kinase domain 132 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1587 Lele-ChrLele29 22680865 22720823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1587 129 359 MAP Kinase Gene Family AT1G18150 35.124 4.10e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lele29g1587 Pkinase 6.9e-49 CL0016