Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1585 ATGGTTACGTCGACGAGCTTCTTGTGCAGTAGAATCCCAGCAAAATTGACTTCAAAACCGAGTTTGCATTTCCGTTGTAATGCCTCTAATGGGCCCTTTTCTTCACTTCGGTCCCTTAGTGTATTTACTCGTAATAATGCCTACACCTTGTGCAGCTCATCACCTTCATTCGGCTTCCGACAAGTCATTCGAAACGGCCCCAACGGCAGCAACAATGAAACTAAGCTTTCCAATAGCACCAAAAGCAGGAGACGACGTCGATTTAAAGCAAGTACAAAGCTGACTAGTGCTAACGAAACTAATAAGAATGGGTCTTCCCAATATCCATCTCAGTCATCCTTGCCAGTGCTCCCGGCAGTGGACTTGAACACCCAGATAGAAGAAAAGGAGGAGGTCCAAGGCATTGAGAGGGGGAGAGAAAGTAGCGTTGAGTCACCGCTCAACGTGAGTGGTATCTACCAGAATGGAGACCCACTCGGGCGGAAGGATCTGGGGAAGAGCGTCGTGCGATGGATTCGTCATAGTATGAGGGCTATGGCTTCCGATTTTGCTTCTGCGGAGGCGCAGGGGGAGTTCTCGGAGCTGAGGCAGCGCATGGGACCAGGTCTCACCTTTGTAATTCAGGCTCAACCTTATCTGAATGCCGTTCCCATGCCTCTTGGCCTTGAAGTTATCTGCTTGAAGGCTTGCACCCATTATCCTACTCTGTTTGATCACTTTCAAAGGGAGTTGCGGGACGTTCTCCAAGACCTCCAACGTAAATCATTGGTCCAAAATTGGTGTGAAACTGAATCATGGAAGCTACTGAAAGAGCTCGCCAAATCAGCTCAGCATAGGGCAATTGCAAGAAAGGTAGCGCAGCCGAAGTCTGTCCAAGGCGTTTTAGGAATGGACTTAGAGAAGGTCAAGGCAATACAGCACAGAATTGAGGAATTCACCAAGCGCATGTCAGAATTACTCCGCATAGAAAGAGATGCCGAGTTGGAGTTTACACAAGAAGAATTGGATGCTGTTCCTAGACCAGATGATACTTCTGACTCCTCGAAGCCGATTGAGTTCTTGGTTAGCCATGGTCAGGCTCAACAAGAACTTTGTGACACTATTTGTAATTTAAACGCCATCAGTACATCTACAGGATTGGGAGGAATGCATCTGGTGTTATTCAAGGTGGAAGGTAACCACCGGTTACCGCCTACTACACTTTCGCCCGGAGACATGGTTTGTGTGAGAACATGTGATAACAGAGGTGCGGTCACAACCTCTTGTCTGCAAGGCTTTGTTAACATGCTTGGGGATGACGGCTGTAGTATCAGTGTTGCTTTAGAGTCACGCCATGGTGATCCTACTTTCTCTAAACTCTTTGGGAAGAGTGTGCGTATTGACCGAATCCAAGGACTGGCTGATACTCTTACCTATGAGCGCAACTGTGAAGCCCTAATGCTGCTTCTGAAGAATGGTCTACGAAAGAAGAATCCTTCTATTGCTGTTGTGGCGACACTGTTTGGAGATGGGGAAGATTTTGCTTGGCTTGAGAAAAATCATATAGCTGACTGGGATGAAGAAAACATAAACGGACTGTTAGGAAGTGAAAACTTTGATAATTCCCAGCTAAAAGCAACAGCACTAGGTTTGAATAAAAATAGGCCTGTGTTGGTTATCCAAGGGCCTCCTGGTACAGGGAAGACAGGTTTGCTCCAGCAACTTATAGCATATGCTGTTCAGCAAGGTGATAGGGTTCTTGTAACAGCACCTACTAATGCAGCTGTTGATAACATGGTGGAAAAGCTTTCAAATATTGGATTGAATATTGTGCGGGTTGGCAATCCTGCTCGCATATCAAAAACCGTGGGTTCAAAGTCTCTAGGAGAAATTGTAAATGCTAAGCTTGCAAGTTTTCGAGCTGAGTATGAAAGGAAGAAGTCAGATCTAAGGAGAGATCTCAGACATTGCTTAAAAGATGATTCATTAGCGGCTGGCATACGCCAACTTCTGAAACAGCTGGGAAGGTCACTGAAGAGAAAGGAAAAGGAGACTATGAATGAGGTGCTATCTAGTGCTCAGGTTGTGCTTGCCACCAATACTGGAGCAGCTGATCCATTGATTCGAAGGCTAGATGCTTTTGACTTGGTTGTTATAGATGAAGCTGGACAAGCAATTGAACCTTCTTGCTGGATTCCTATATTGCAGGGAAAGCGCTGCATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAGAGGCTTTGGAAGGAGGTCTTGGAATATCATTACTGGAAAGGGCTACAACTTTGCATGAAGGGGTTCTCACCACAAGGTTAACAATACAATACCGTATGAATGATGCAATTGCTAGCTGGGCTTCAAAGGAGATGTATGGTGGATTATTGAAGTCCTCTGAGATTGTCTTTTCTCATCTTCTTGTTGACTCTCCTTTTGTCAAGCCTACATGGATAACACAATGTCCTCTGTTGTTGCTGGATACAAGAATGCCATATGGAAGTCTGGCAATTGGTTGCGAAGAGCATCTAGACCCAGCTGGAACAGGTTCATTTTATAATGAAGGAGAAGCTGATATTGTTGTGCAGCATGTCTTTTCCTTAATTTGTGCTGGTGTCAACCCGGCAGCTATTATGGTGCAATCTCCATATGTTGCTCAAGTACAACTTTTGAGGGACATGCTGGATGAGCTGCCAGAGGCTGTTGGTACTGAGGTTGCAACAATTGATAGCTTTCAAGGACGGGAAGCTGATGCAGTAATTATATCCATGGTCCGTTCAAACGCTTTAGGTGCTGTTGGATTCCTGGGTGATAGCAGAAGAATCAATGTTGCCATCACGAGGGCCCGCAAACATGTTGCAGTGGTATGTGACAGCTCCACAATTTGCCATAATACCTTCTTAGCAAGGCTTCTACGTCACATCCGGCATTTCGGTAGGGTGAAACATGCAGAACCCGGTCATTCTGGGGGTTCTGGGCTGGGCATGAATCCAATGTTACCCTCCATTAATTAG 3021 0.4568 MVTSTSFLCSRIPAKLTSKPSLHFRCNASNGPFSSLRSLSVFTRNNAYTLCSSSPSFGFRQVIRNGPNGSNNETKLSNSTKSRRRRRFKASTKLTSANETNKNGSSQYPSQSSLPVLPAVDLNTQIEEKEEVQGIERGRESSVESPLNVSGIYQNGDPLGRKDLGKSVVRWIRHSMRAMASDFASAEAQGEFSELRQRMGPGLTFVIQAQPYLNAVPMPLGLEVICLKACTHYPTLFDHFQRELRDVLQDLQRKSLVQNWCETESWKLLKELAKSAQHRAIARKVAQPKSVQGVLGMDLEKVKAIQHRIEEFTKRMSELLRIERDAELEFTQEELDAVPRPDDTSDSSKPIEFLVSHGQAQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDNRGAVTTSCLQGFVNMLGDDGCSISVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLLKNGLRKKNPSIAVVATLFGDGEDFAWLEKNHIADWDEENINGLLGSENFDNSQLKATALGLNKNRPVLVIQGPPGTGKTGLLQQLIAYAVQQGDRVLVTAPTNAAVDNMVEKLSNIGLNIVRVGNPARISKTVGSKSLGEIVNAKLASFRAEYERKKSDLRRDLRHCLKDDSLAAGIRQLLKQLGRSLKRKEKETMNEVLSSAQVVLATNTGAADPLIRRLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSREALEGGLGISLLERATTLHEGVLTTRLTIQYRMNDAIASWASKEMYGGLLKSSEIVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLAIGCEEHLDPAGTGSFYNEGEADIVVQHVFSLICAGVNPAAIMVQSPYVAQVQLLRDMLDELPEAVGTEVATIDSFQGREADAVIISMVRSNALGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGHSGGSGLGMNPMLPSIN 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1585 1006 Gene3D - 335 466 - -
Lele29g1585 1006 Coils Coil 657 677 - -
Lele29g1585 1006 Coils Coil 633 653 - -
Lele29g1585 1006 SMART ultradead3 528 781 IPR014001 -
Lele29g1585 1006 MobiDBLite consensus disorder prediction 93 114 - -
Lele29g1585 1006 FunFam DNA-binding protein SMUBP-2 isoform X2 335 466 - -
Lele29g1585 1006 Pfam AAA domain 532 748 IPR041677 GO:0004386
Lele29g1585 1006 MobiDBLite consensus disorder prediction 64 114 - -
Lele29g1585 1006 Gene3D - 780 988 IPR027417 -
Lele29g1585 1006 Coils Coil 309 329 - -
Lele29g1585 1006 FunFam DNA helicase A 780 988 - -
Lele29g1585 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 531 969 IPR027417 -
Lele29g1585 1006 CDD SF1_C_Upf1 782 978 IPR041679 -
Lele29g1585 1006 CDD DEXXQc_SMUBP2 531 781 - -
Lele29g1585 1006 Pfam AAA domain 758 961 IPR041679 -
Lele29g1585 1006 SMART AAA_5 547 762 IPR003593 -
Lele29g1585 1006 Gene3D - 315 764 IPR027417 -
Lele29g1585 1006 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 183 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1585 Lele-ChrLele29 22656039 22667029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1585 523 721 Core DNA Replication Machinery Family AT1G08840 25.373 3.11e-06 49.3