Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1580 ATGAATGGTAGTAGTGTTAGTGGTGGAGGATGGGGAGCTACGGGGATGATGGGGATCACTAGGTCACCGTTCACAGTCTCTCAGTGGCAGGAACTGGAGCACCAGGCGTTGATTTTCAAGTACATGGTGGCCGGTCTTCCTGTGCCTCCCGATCTTGTCCTTCCCATTCAGAAGAGCTTCGAGTCCATTTCTCAAAGGTTCTTTCACCATCCCACCATGAGTTATTGTTCCTTTTATGGGAAGAAGGTGGACCCAGAGCCAGGACGTTGCAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCAAAATACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCATACCATGACACAGTCATCATCCACCGTGCCATCACTGACTGTCACAGGTGACAGCAGTAGAAATGAAAACTTCCAGAACCTTTCCACAAATGCCTTTACTAATCCCCAAGGTACTGGTTCTAGAACCTACCAGCCCCAGTATAATCTGGATTCCATTCCATATGGGATCCCAAGTAGAGAATACAGGGATCTTCACGGGCTTAAATCTGAGGGTGGTGAGCATAGTTTCATTTCTGAAGCTTCAGGGAGCAACAGGTTTGTCCAGATGGAATCACCGATGGAAAACACATGGCCTTTAATGACAACCAGGGTTGCCTCAAATGCTACCTCGATATCAAACAACAACACCATGCTGGAGAGTGATTATCCTCAGCACTCATTTCTGTCTGGTGGGTATGCATCCGGGGAGCCTGTGAAGCTGGAAGGTAGCCAGTCTCTTCGGCCTTTATTTGATGAATGGCCTAGAAGCAGGGAGTCATGGTCTGGAATGGAAGATGATAGATCCCAGGAGGTAGCTTTCTCTACAACACAACTCTCAATATCAATCCCTATGTCATCCTCCGACTTCTCTGCAACTAGCTCCCAATCTCCAAATGGTGAGATTTTGATAAGGCAAAGTATCAACATGTAA 1017 0.4798 MNGSSVSGGGWGATGMMGITRSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQKSFESISQRFFHHPTMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESHTMTQSSSTVPSLTVTGDSSRNENFQNLSTNAFTNPQGTGSRTYQPQYNLDSIPYGIPSREYRDLHGLKSEGGEHSFISEASGSNRFVQMESPMENTWPLMTTRVASNATSISNNNTMLESDYPQHSFLSGGYASGEPVKLEGSQSLRPLFDEWPRSRESWSGMEDDRSQEVAFSTTQLSISIPMSSSDFSATSSQSPNGEILIRQSINM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1580 338 Pfam QLQ 23 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele29g1580 338 MobiDBLite consensus disorder prediction 116 177 - -
Lele29g1580 338 Pfam WRC 85 127 IPR014977 -
Lele29g1580 338 PANTHER GROWTH-REGULATING FACTOR 5 21 317 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele29g1580 338 MobiDBLite consensus disorder prediction 127 177 - -
Lele29g1580 338 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Lele29g1580 338 ProSiteProfiles QLQ domain profile. 23 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele29g1580 338 SMART QLQ_2 22 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1580 Lele-ChrLele29 22577257 22580624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1580 19 127 GRF Transcription Factor Family AT3G13960 61.947 5.29e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele29g1580 WRC 1.8e-21 No_clan