Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1577 ATGCATTTTAACCGAGCTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGCGGGGAGTAACCAATATTCTATGGATGAAGGGGATATGTCTTCTCTTAGGAGCAAGGCTCATGAAAGCATTCAGCACGCTGACATGCTCAGTGTCAATTCCAGTCATGATTCTCTATCTGAAAATGGGGATAGTAAACAGACTTTGTCAATTAAGTGTCAGGAGTCTAAGTACCAAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCCAGTGATGCTAATTTAGCGAATGGTAGCCATCCTAAGAATGCAGACAGAAGAAATGCTTCTTGTAGTTCGGCTTCACTTAATATGTTAGGAGCAGAAGGATCTGGAAGTGCACAATCTTTTGACATGTCTGCCTTACCTGAGATTCCTCCTTCTAAAGATGTGGATACTGGTGAGAGCTCACCTAAGGTACAAAGCAAGGATGCAAAGTCTCAAAGTGTTAAGTCTCATTCGACCATTCCAAGGTTAATGGATGTGGAAAGAGATGCACGTTCTCTTATTCCTGAAAAATCTGAATGCTTCACAGAAAATACCGATTCATCATTGAGAAAAGTGATATCAACTTTGGTTGTTTCTGGCGAGAAACCTCTTGCCATTAAGGATAATCTTATTGATGGTAGCTCCGTGCCTTTAGTAAAAATATATTCCAAGTCAGAAGCAGAGGCTGTCAATGAAGTTGGGGGTGCTCCAAATGAAGCCGGTAATGTTGCAGTCCAAGACGAGCAGGATAAAGCTGAGCAACCACTCGGATCACCTGGCATGGAGGAGACTCGATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGGGAAGATCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAACACACTTATTGCATGCGAGAAATGCTTCAGAAGGTCCCTGAAGGAGACTGGCTCTGTGAAGAATGCAAATATGCGGACACAGAAAATCAGAGGCTGGATGTTGAAGAAAGAAAAAATCCAAAAGTTAGTTCTACATCAGAGCATTCTGGCAAGAGGCTATCTGAGAATATAGAACTGGCTCCTGTACCAAAAAGGCAGGCTCTGGAATCAAGCTCAGGTTCACCGAAGTTATCAAGCCCCAAGAGAATTGTTGCACTTTCTCAAGAATCTTCATTAAAGAACTTCGATAAAGGTAAAGTGAAGCCTGATAATCAGATGCCGATTCGTAATCACTCTGGCAGTGATAACATGGAAACTGTTTGTTCTCCTTCTGCTGGCCCTCGGAGTCTACTTCGAAAGGGTATGCTGTTGAAATCTAATTCATTCAACGTATTGAATTCAAAGCCTCGAGTCAAACCTGTTGATGAAGTTGTTCACCAGAAGCGGAAAGGGCCTGGTGAAAATACTACTAAGAATGTGGAGACACCTGCCCGGATGATAGGCAAATCTATGTCATTTAAATCCATGAATTTGGGTCGTTCGAATACAACTGCATCAAAAGTTAAATTGCTTTCATCAAAAACTATACCTGCTCAGGATTTGAAAGGAACAGGGCCTGCAAAAGACTCCAGTGCATTTGATAGGAAAAGTCTCTCTAGGGTTGATCGACCGGTGGTTTGCTCAACAATGGCTACCTCTGTCGTTTCAACACCCAAAGGTGATCAGAAGAGCACAACTCTTAGTGAAACTATTAAGCCTTCATCAGTTAGCAACATCCGTGACTTGAAGGTGAATCAAGATGGAAAATTAAGTACCTTATCAAAGTCTATTAGTAACGTAGGCGGTAAAGGTGCAGAATCTCAAGTCTGTTCAGGGAGAATATATACCAGTGGTGATGAATTTGTACAAGATTCGCAGCCTCGAGTACGAGAAACAGCCAATCCAGTTGAGAAAACCAGAGACAGCTCTAGTGATTGTGTGAGGACAGATGCCATTGCTACTCCCAAAGGATGCTGTCAAAAGTGTAAGGAGTTTGGTCATACTACAGAATGTTGCACAATTGGTAAAACCCAAGATTCTGGTAATGAAGTTTCTGTTGCTACCACAAGTAGTTCTATAGAGGAGATGCATAGAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGGATGCCTGAAATATACAAAAAGAAAGAAGTGGCTAGTCAAATGGATGAGCTTGGCAAAGACTTGAAATGTGAAGCCACAGTTCAAGACCAAGTATTGGTTTCTGGCACACCAAAGAATAGTATATCTGCTGAAGAAATTCAGGATAGGCAGGACACCATTGAGAGCACTGCAGCTGCATCTTCGAAATGTTCATCTGATGAAAAGAAGCTTAACTTAAGCCAAAGTGATTCTTGTTCTCAATTAGGAAACTCAGGTGTTGTTGGTCCTTCCATTGGAAAGATTGATTTGAAAGACTTTCCTAATCAAACTCTGGCAATCTCACGTGTTCTTCCAAAGATGGCTGTTCCAGAATATGAATACATCTGGAAGGGTATCTTTGAGCTGCATAGGAGTGGAAAGCCTCCTGACTTATGTCCTGGATTTCAAGCACATTTGTCAACTTGTGCTTCCCCGAAGGTTCTTGAAATGGTGCACAAATTACCATCCAAAATTTCTCTCTGTGAAGTTCCTCGCTCAAGCACATGGCCCTCACAGTTTCATCAAGGTGGTGCTAAAGAAAATAATATTGCACTTTACTTCTTCGCCCAAGATATTGAAAGTTATGAGAAACACTATGGGGCTTTATTGGATCACATGATGAGGAATGATTTGGCACTTAAAGGAATCTTTGATGGTGTTGAACTACTCATGTTCCCATCTAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAAGGGGAGAAGGATAAATCGTTCAGATTCTTCAGAAAAGACTTGTTTTCCTAGCTTGAATATGATGCCAGTTAAAAAGGATTTTCCTAATGCCATTATGACTCTGTCTGAGATCCACTGCTCACTAAAGCGAATGGATGAAGAGTCAATTGCTGGTGATAGGACATGTATGGTTCTCCCAACTACTTCCCTAGACCAGAATCGTTCTACAGAAAGTAGGGATTTTGAGGTCAAAGAATCTAATCTTGACCAGACGCACTCAGGCTCTCAAGTAAAATCAGAGGAACAAGATATTAAAATTGACACCAAACCTACATCAAGCAGTCTGGCTAGTGGTGCACAGTTCTCTCAAGAGTTGAAATCTACCGGTTCATCTATGAAAGGTATATCCCTGGAACATGAACCGGAAAAAGAGTCTGAACCTTCTCCTGGAGCAATGGGAACAAATGTTACTAGTAGGAATATGGAAACAAAATTTGATCCTGATATATCTGTTAAAGAAGAGAAGTCTTTGCCTTCAGGGATTCCTTCTCTTGGCTCTCAAGAGATATGTGTTGCAGGTGACAGTAATCAACAAAGGCATAAAAAGCAACAGAAAGATGATCAGTATAATGACTTTGAGATGGCTTTTCAGGGAGAGGTAACTGTAGAAGCGGTGAAGCTTCAGCAGTCTAGTGATAAAAGGTTTCAGCATATTGATGTAATGGACACTGCTATGCAGACTTCTGCAGTTACATGCAAGAGACTTTGGAGCGAGGCAGATGTCAAATTGGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACAGATGACTGTGGAGCTTATGGATGTAGCAGTTCTGGGTGTAGAGATTCTTATAGGAACAATTTTGCATCACATGCAAATGATCTTGGAACCGGTTCTTCAATTAAGGAGAAAGGCTGTGATGAAATCTGTGATGAGAAAATCATCGTGGAAGACTATGGAACAATGGAAAGAACTTTCTTTCCTGTTGATGCCCATAACGTAAATGATTCTCATTTGAGTCCAAATAGCTCGTCGTTGAAAGGGCCTCATGTGTATGATGATCAATTTCATGATGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCACCACATAGGGAAATGCTGCCTTTCTTTGTTGGGGAAATAGAGAAGAAGCATTGTCGGGAAAATCCTCCGGATTGCTTGGCAGATGAGCAAGAGGATGATGGGGTTGCTGCATCTCTCTCTCTTTCATTATCGTTTCCATCTTCAAACAAAGAACGTGTTAAAACTGTTTCAAAAGCAGAGCAGCTTTTGCCTGATGGACGCCATGTGAATACTTCGTTGCTCCTTTTTGGGAGATTTGCGGACAAATAA 4302 0.4131 MHFNRACMGSKVEFSDENCRLAGSNQYSMDEGDMSSLRSKAHESIQHADMLSVNSSHDSLSENGDSKQTLSIKCQESKYQEGLDDNTSCISRASDANLANGSHPKNADRRNASCSSASLNMLGAEGSGSAQSFDMSALPEIPPSKDVDTGESSPKVQSKDAKSQSVKSHSTIPRLMDVERDARSLIPEKSECFTENTDSSLRKVISTLVVSGEKPLAIKDNLIDGSSVPLVKIYSKSEAEAVNEVGGAPNEAGNVAVQDEQDKAEQPLGSPGMEETRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKYADTENQRLDVEERKNPKVSSTSEHSGKRLSENIELAPVPKRQALESSSGSPKLSSPKRIVALSQESSLKNFDKGKVKPDNQMPIRNHSGSDNMETVCSPSAGPRSLLRKGMLLKSNSFNVLNSKPRVKPVDEVVHQKRKGPGENTTKNVETPARMIGKSMSFKSMNLGRSNTTASKVKLLSSKTIPAQDLKGTGPAKDSSAFDRKSLSRVDRPVVCSTMATSVVSTPKGDQKSTTLSETIKPSSVSNIRDLKVNQDGKLSTLSKSISNVGGKGAESQVCSGRIYTSGDEFVQDSQPRVRETANPVEKTRDSSSDCVRTDAIATPKGCCQKCKEFGHTTECCTIGKTQDSGNEVSVATTSSSIEEMHRSDNVKAALQAALLRMPEIYKKKEVASQMDELGKDLKCEATVQDQVLVSGTPKNSISAEEIQDRQDTIESTAAASSKCSSDEKKLNLSQSDSCSQLGNSGVVGPSIGKIDLKDFPNQTLAISRVLPKMAVPEYEYIWKGIFELHRSGKPPDLCPGFQAHLSTCASPKVLEMVHKLPSKISLCEVPRSSTWPSQFHQGGAKENNIALYFFAQDIESYEKHYGALLDHMMRNDLALKGIFDGVELLMFPSNQLPEKSQRWNMLFFLWGVFKGRRINRSDSSEKTCFPSLNMMPVKKDFPNAIMTLSEIHCSLKRMDEESIAGDRTCMVLPTTSLDQNRSTESRDFEVKESNLDQTHSGSQVKSEEQDIKIDTKPTSSSLASGAQFSQELKSTGSSMKGISLEHEPEKESEPSPGAMGTNVTSRNMETKFDPDISVKEEKSLPSGIPSLGSQEICVAGDSNQQRHKKQQKDDQYNDFEMAFQGEVTVEAVKLQQSSDKRFQHIDVMDTAMQTSAVTCKRLWSEADVKLEDGENSSKKLKTDDCGAYGCSSSGCRDSYRNNFASHANDLGTGSSIKEKGCDEICDEKIIVEDYGTMERTFFPVDAHNVNDSHLSPNSSSLKGPHVYDDQFHDEIPNLELALGGEMKPPHREMLPFFVGEIEKKHCRENPPDCLADEQEDDGVAASLSLSLSFPSSNKERVKTVSKAEQLLPDGRHVNTSLLLFGRFADK 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1577 1433 ProSiteProfiles Zinc finger PHD-type profile. 292 343 IPR019787 -
Lele29g1577 1433 PANTHER - 292 991 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 1078 1104 - -
Lele29g1577 1433 SUPERFAMILY FYVE/PHD zinc finger 281 343 IPR011011 -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 150 170 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 246 286 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 761 789 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 351 399 - -
Lele29g1577 1433 SMART PHD_3 294 341 IPR001965 -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 1037 1130 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 413 439 - -
Lele29g1577 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 356 IPR013083 -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 425 439 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 385 399 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 125 170 - -
Lele29g1577 1433 MobiDBLite consensus disorder prediction 775 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1577 Lele-ChrLele29 22549752 22557838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1577 291 343 C2H2 Transcription Factor Family AT3G01460 37.736 5.61e-06 49.3