Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1572 ATGGATTTGACGAATTTTGGCGGAAACCATGGATTGTGCCGAGTAGGTTCCTATTATTGTCATTCATCCAAATCTCCTCCTTCTACTCCAAAACAAAGTGGTAATAGAAATGGTTATTCCAGGTTGAAGATAGTGAGTATAGTTTCGGGTGTAGTTGGATTGGTTTCTCTTACATTCATTGTCTGTATATGTTGGGCTATGAAGCGCAAGAATCCTAATTCTGTCTACTTAGAAAGGCAAACAATGCCTCATGTCCTAAATAGTTATTATTTTCCAAAAGAAGGTTTCACGTACCAGGATCTCTTGGAAGCCACTGGTAATTTCTCAGAAGCCGCAATTATAGGAAATGGAGCGTGTGGCACAGTCTACAAGGCTATTATGGCTGAGGGTGAGGTGATTGCTGTCAAAAAGCTGAATTCTTGTGGAGAAAGAGCAAATGTTGACAGAAGCTTTCTTGCAGAGATTTCAATCCTTGGAAAGATCAGGCACAGGAATATTGTGAAGTTGTATGGATTTTGTTATCATGAAGATTCTAGGATTCTCTTGTATGAGTACATGGAAAACGGCAGCCTCGGAGAACAACTCCATTCAAATCCAGAATCATAATATGCTTACACTATGAAGGTGACTGAGAAATGTGACATCTATAGCCTTGGGGTATTTTTGTTGGAAATAGTCACAAGCTGTTCACCGGTTCAACCGCTGGAACAGGGCGGTGATTTGGTGACTTGGGTGAGAAGATCATTTCAAGCGGCAGTACCTTCATTGGAACTATTCGACAAGCGACTGAATCTGAGTGAACAAAGAACAATTGAAGAGATGTCTCTTATTCTCAAGATTGCATTGCTCTGCACCAGTGTGTCTCCTCTAAAGAGGCCAACAATGAAAGAAGTCATTGCAATGTTGATAGAAATGAAAACGTGGCGCATCAATATTTACTTGGTTTATTTTATGCTAGAAATGAAAATTAGAACTTGGATCCTGAGCCTTCATACGTAA 999 0.4004 MDLTNFGGNHGLCRVGSYYCHSSKSPPSTPKQSGNRNGYSRLKIVSIVSGVVGLVSLTFIVCICWAMKRKNPNSVYLERQTMPHVLNSYYFPKEGFTYQDLLEATGNFSEAAIIGNGACGTVYKAIMAEGEVIAVKKLNSCGERANVDRSFLAEISILGKIRHRNIVKLYGFCYHEDSRILLYEYMENGSLGEQLHSNPESXYAYTMKVTEKCDIYSLGVFLLEIVTSCSPVQPLEQGGDLVTWVRRSFQAAVPSLELFDKRLNLSEQRTIEEMSLILKIALLCTSVSPLKRPTMKEVIAMLIEMKTWRINIYLVYFMLEMKIRTWILSLHT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1572 332 SUPERFAMILY Protein kinase-like (PK-like) 88 313 IPR011009 -
Lele29g1572 332 Pfam Protein kinase domain 110 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1572 332 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 72 185 - -
Lele29g1572 332 Gene3D Phosphorylase Kinase; domain 1 72 181 - -
Lele29g1572 332 ProSiteProfiles Protein kinase domain profile. 108 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1572 332 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 203 307 - -
Lele29g1572 332 Gene3D Transferase(Phosphotransferase) domain 1 182 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1572 Lele-ChrLele29 22509284 22510602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1572 25 209 Receptor kinase-like Gene Family AT1G49730 35.961 1.37e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1572 Pkinase 3.5e-18 CL0016