Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1566 ATGGTGGAGGCCAAGTTGCCGCCAGGTTTCAGGTTCCAACCCAGAGATGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACACACTCTGTTGATTCCAATTCCACCCTCATGATGGACGTTGACCTTAACAAGTGTGAGCCTTGGGATATTCCAGGAAGGGCTCCCAAAGGCAAAAAGACTGACTGGGTCATGCACGAGTTTCGCCTTCATTCTCCCCTCCCTCATCTCTCTCATCATTCTTTCCCCAAGGAAGACTGGGTGCTGTGTAGGGTATTCTATAAGAACAGAGAAGAAGAAAGTGGAAAACCTGACATGGGAAGCTGCTATGACGACGCCGGCTCTTCGTCTTTCCCAGAATTAATGGATTCTTACATCAGTTTCGATCAGCCTTCTTCTGCAGCTCATCACCACCACCATCAATATGAGCAAGTGTCCTGCTTCTCCAACAATGCTTTATTCCCTCCTCCTCCTCCAACAAACCCTAACCCTAATCCTAGCATCTTCAACTACCATGATCACAACAACTTATTGGGTCCACCAAATGGAGTAGGAGCAGCCGTAGGATCATTCCCTCATGACTCCAAGGTTCTCAATGCTTTGTTGGCACAGCTCACCAAGATGGAAACTCAGGAAGGATCGCCTTACTTATCTCAAGCGGCCATTCCCAATTATTTATGGAAAAAGCACTGA 696 0.4698 MVEAKLPPGFRFQPRDEELVCDYLMKKVTHSVDSNSTLMMDVDLNKCEPWDIPGRAPKGKKTDWVMHEFRLHSPLPHLSHHSFPKEDWVLCRVFYKNREEESGKPDMGSCYDDAGSSSFPELMDSYISFDQPSSAAHHHHHQYEQVSCFSNNALFPPPPPTNPNPNPSIFNYHDHNNLLGPPNGVGAAVGSFPHDSKVLNALLAQLTKMETQEGSPYLSQAAIPNYLWKKH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1566 231 Gene3D NAC domain 55 101 IPR036093 GO:0003677|GO:0006355
Lele29g1566 231 Gene3D NAC domain 15 54 IPR036093 GO:0003677|GO:0006355
Lele29g1566 231 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 53 - -
Lele29g1566 231 ProSiteProfiles NAC domain profile. 6 153 IPR003441 GO:0003677|GO:0006355
Lele29g1566 231 SUPERFAMILY NAC domain 3 97 IPR036093 GO:0003677|GO:0006355
Lele29g1566 231 Pfam No apical meristem (NAM) protein 7 56 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1566 Lele-ChrLele29 22479624 22482707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1566 54 228 NAC Transcription Factor Family AT1G56010 42.584 8.74e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g1566 NAM 4.3e-12 No_clan