Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1555 ATGGATCGTATAATGGAAGATTTGAGAAGCACAGAGGAGTTTGACGAACTTCCGGGGTTTCGATTCCATCCCACAGATGAAGAACTCGTGAGATTCTACCTCAGAAGGAAGCTTGACAAGAAACCCATCAGCATCGAACTCATCAAGCAGATTGATATTTACAAATACGACCCTTGGGATCTTCCGAAAGCTAGTTGTATGGGAGGAGAGAAGGAGTGGTACTTCTACTGCAGAAGGGGAAGGAAGTACAAGAACAGCATAAGGCCGAATAGAGTGACGGGATCAGGGTTCTGGAAAGCAACAGGGATAGACAAGCCTGTGTATTCTCTTGCTGGAGACTGCATTGGCCTCAAGAAAACCCTCGTCTACTATCGTGGCAGCGCCGGCAAAGGCACCAAAACTGACTGGATGATGCATGAATTTCGCCTTCCCTCCAACAATGTCAATGACCCAGCTTCTAATAATAATCCCCAAGAAGCTGAAATTTGGACACTCTGTAAAATTTTCAAAAGAACAGTGACGCAAAGAAAGTGTACACCAGATTGGACACACTTGGCTGCAAAGCGTCGTTGCAGTGACAATAAGAACAGCAGATCAATGAGCGTTAATAATAGTAATGTGGAGTCTTGTAATAGTACTATTACTTATGATCAAGAAGCATATATCAACTTTGGCGGCAGCCCACCAGAGCAGAAGCCTGCAGTTGTGCATAACTACAGCACAAGCAATAATCATTATAATGATAAAGGGAATCATCATGTGAGCCACCATTTCAGTACTTCTTCTTCAATGGTGGCACAGCAGCCTCCTCATCAATTAACTGCGTCGTCATCATCACTATCTCCATCATCATCTTTGAGCTTCTGGGGAAACCATCAGCAGGCTTCAAATGACCTGTCTGCGTTTGAGAACTCATGGGATGAGCTTGAATCAGTCGTGCAGTTCTGCTCTTGA 954 0.4444 MDRIMEDLRSTEEFDELPGFRFHPTDEELVRFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASCMGGEKEWYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSLAGDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNNVNDPASNNNPQEAEIWTLCKIFKRTVTQRKCTPDWTHLAAKRRCSDNKNSRSMSVNNSNVESCNSTITYDQEAYINFGGSPPEQKPAVVHNYSTSNNHYNDKGNHHVSHHFSTSSSMVAQQPPHQLTASSSSLSPSSSLSFWGNHQQASNDLSAFENSWDELESVVQFCS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1555 317 MobiDBLite consensus disorder prediction 250 279 - -
Lele29g1555 317 ProSiteProfiles NAC domain profile. 16 171 IPR003441 GO:0003677|GO:0006355
Lele29g1555 317 MobiDBLite consensus disorder prediction 256 279 - -
Lele29g1555 317 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele29g1555 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 267 - -
Lele29g1555 317 FunFam NAC domain-containing protein 35 25 174 - -
Lele29g1555 317 SUPERFAMILY NAC domain 12 170 IPR036093 GO:0003677|GO:0006355
Lele29g1555 317 Gene3D NAC domain 25 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1555 Lele-ChrLele29 22402203 22403848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1555 1 213 NAC Transcription Factor Family AT5G39820 51.899 3.02e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g1555 NAM 2.7e-35 No_clan