Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1553 ATGCCTCTTTCTCCTTCAATGGCTGCTTTTCCTCAATTCTATTCAAACTACACAATATTCCCCAGTGATTTCCCTGAGTTTCAAACCCAAGCTTCAGCCATTAATGGCAACGTTAATAATTTCTCAGTTATAGAGAATAGAATGTGTGGTGGTCACCAAGATAGCTTCATCAACAATCATATTCCCAATAATGGTGCAGCACTGGATCATGTTTCTTCAGTATTGGAGTGTGATACTATGGCTTCTTCGTCTTGGTTTCCTGCGTTTTCTGATCAGCTAGCAGGGAGCTTATCGGACTTGGCCATTCCGGTGATTTATGGCAGCGCTGATGGCAGTTTTCAGAGCTTGACCGCTGGCGGATATAAACCATCGCACCATCTGGGTGATTTTGGTGAAGAATGTTGCGGCTTTGTGGAGGATATTATGAAGCCACCTTCTTATCCAAATTCTGCCGCAGAAAAGTGGGGATCATATCAAGGCAATCAAATGGCAGCAGTTGAGGAACCAAACATAAAGGTAGGACGATACTCAGATGAAGAAAGGAAGGAGAGAATTCTGCGATATTTGAAGAAAAGAAACCAAAGAAACTTTAACAAAACCATCAAGTATGCTTGTCGGAAAACTCTAGCTGATAGGAGAGTCAGAGTTAGAGGAAGGTTTGCTAGAAACAACGACCTCTGTGAGGATGAAATCAGGATGAAGAAGAATGAGAATATTACTCACAAGCAGGACCTGTACGGTGGTGACGATTCCATCCAATTTCAGATAAAGAACGATGATGATGAGGACGATTGGTTGCAAGAGGCAATGGCAAGTTTGGTGTATCTGTCTCATTCTTCGCCTGAAGAACGATGA 855 0.4257 MPLSPSMAAFPQFYSNYTIFPSDFPEFQTQASAINGNVNNFSVIENRMCGGHQDSFINNHIPNNGAALDHVSSVLECDTMASSSWFPAFSDQLAGSLSDLAIPVIYGSADGSFQSLTAGGYKPSHHLGDFGEECCGFVEDIMKPPSYPNSAAEKWGSYQGNQMAAVEEPNIKVGRYSDEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNDLCEDEIRMKKNENITHKQDLYGGDDSIQFQIKNDDDEDDWLQEAMASLVYLSHSSPEER 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1553 284 Pfam CCT motif 181 223 IPR010402 GO:0005515
Lele29g1553 284 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 112 243 IPR045281 GO:0009909
Lele29g1553 284 ProSiteProfiles CCT domain profile. 181 223 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1553 Lele-ChrLele29 22373704 22375080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1553 136 228 C2C2-CO-like Transcription Factor Family AT5G24930 37.634 9.06e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele29g1553 CCT 8.9e-17 CL0281