Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1547 ATGGCTTCTTCATCTTCTTCACCAGTTCTCATAGCCCTTGCAACTGCTTCTTCTGTTTGTGTGTTCTTGAGTTGCTTGGTCGCTGTATCATCACAAGATCAAAACGTTACTACGGATCCTTCTGAAGCGAGAACTTTGAATTCAATCTTCAACAAATGGAGTAAATCGGCATTACAAAATGAGTGGAATATAAGCGGTGAGCTATGCAGCGGACGAGCCATCGACAGCATCACCGCCATTGAAACCTTAAATCCATTCATCAAATGCGACTGTTCCAGTGGCTCTACCTGCCACATCACTGCTCTGAGGGTTTATGCATTGGATGTTGTTGGGGAAATCCCACCAGAGCTATGGACTCTCACTTACCTTACCAATTTGAAACTCGACCAGAATTACTTGACGGGTTCTCTACCACCAGCCATTGGAAATCTCACTCGTATGCAGTACTTGAGCTTCGGCATCAATTCCTTATCAGGGGAGCTTCCCAAGGAATTGGGAAATCTTTCCGAGCTAAAATTATTAGCTCTTGGATCCAACAACTTCTCTGGTTCTATGCCACCTGAACTAGGGAAACTGGTGAAATTGGAACAACTCTATTTAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCCACTTTTGCAAATCTTAAAAACCTGGCTACAGTATGGGCTTCAGACATGGAACTCACAGGCAGGATACCTGACTTCATAGGAAATTGGTCTAAGCTTACAGCCTTGAGGTTTCAGGGTAATTCTTTTGAAGGACCAATACCATCATCATTTGTAAATCTGACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGCATTTATACGGAATATGAAGTCTTTGAATGTCTTAGTATTGAGGAATAACAATATATCTGATTCAATTCCATCTAATATTGGTGACTTTCAGAATTTGAAACAGCTGGATTTGAGCTTCAACAATATCACGGGACAGATTCCAACATCATTTTCCAATCTGAGCTTACTAGAGAACTTATTTCTTGGAAACAACAAACTCAGTGGTACTATCCCTAACCAGATAAGCCCGTCTCTTCGCAATATAGACTTGTCCTACAACAGTCTATCAGGGAGCCTCCCTTCTTGGGTAAACCAACTAAATTTACTTGTCAATTTGGTTGCCAACAACTTGACAATAAATTATCCAGATAGCAGTGGTCTTCCTAAAGGACTCGAATGTTTGCAGCGAAATTTTCCCTGTGATCGCGGTCATGGAAGATATTCTGACTTCGCGATCAAGTGTGCTGGTCCTCCAATTACAACATCAGATGGAACTAAATATGAGAGTGAGAAGGAGGCACTTGGCGCTGCTACTTATTTTGTTACTGATACAAGAAGATGGGCAGTTAGCAATGTCGGGTTATTTACCGGGTCCAACAATCCTCTATACAATAACTCTGTGGGTAGTCAGGCTGCTGGTACTTTGGACCCAGAGCTCTTCCAGACTGCTCGGATCTCTGCTTCTTCATTGAGATATTATGGCCTGGGGCTCGAAAATGGGGCTTACAACATATCCCTCTATTTCTCAGAATTGTCTATTCTAGATACTAATACTACATGGAGAAGTCTAGGAAGACGAATATTTGATATATATATCCAGGGTAATCGTGTTTTGAAGGATTTTAACATTAAAAGGGAAGCTGAGGGGGCCTCTTTTAAAGCGATCCAAAAGGATTTTCGTGGTATTCGTGTCTCAGAAAACTATCTAGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAGCTCAAGGTACTTATGGTCCTATGATTTCAGCAATCAGAGCTCGTCCAGAGTTCACTCCCACAGTCAGCAACAGACCTCCAACCAACGGAAAGGACAGAACTGGTCTGATAGTGGGAATTGTTGCTGGTATTGGAGGAGTAAGCTTTCTGTTTTTTCTTGTGGTTTACTGTATCATTCAGAGAAGAACGCATCATGGAGGTGATGATGAAGAGCTTTTAGGTATCGATACAAAGCCATACACTTTCAGCCATTCCGAGTTAAAGAATGCCACAGATGACTTCAATCCTGCCAACAAGCTGGGCGAAGGAGGTTTTGGACCTGTCTATAAGGGAACACTTAATGATGGAAGAGTAACTGCTGTGAAACAATTATCTGTAGCATCTCATCAAGGAAAAAGCCAGTTCATAACCGAGATTGCCACAATATCTGCTGTGCAACATCGTAATCTTGTCAAATTATATGGATGTTGCATTGAAGGACATAAAAGACTTCTTGTTTATGAGTATCTAGAAAATAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTTAACTCTCAACTGGCCCACGCGCTACGATATTTGCATGGGCGTAGCTAGAGGTTTAGCGTATCTTCATGAAGAGTCACGGCTACGCATTGTGCACCGTGATGTGAAGGCTAGTAATATTCTGCTTGATCACGAGCTTGTCCCTAAAATATCTGATTTCGGTTTGGCCAAATTATACGACGATAAAAAGACCCATATAAGCACCCGTGTAGCCGGGACAATTGGATATCTTGCTCCGGAGTATGCTATGCGTGGGCACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTGTGGCCCTGGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAATTTGGAAGGGGAGAAGATCTATCTTCTAGAATGGGCTTGGCAGCTGCATGAACGGAACTGTATAGTTGAACTGGCAGATCCTAGACTGTTATCAGATTTCAATGAGGAAGAATTTAAGAGAATAGTAGGGATATCTCTTCTGTGCACTCAAACTTCACCGTCATTAAGACCGGCGATGTCCCGCGTCATGGCGATGCTTTCTGGAGATATGGAAGTGAGCACTGTGAGTTCAAGGCCTGGTTACTTGACGGACTGGAAATTTGATGATGAGTACACCTTCATGACTGGCTTGGCTACAAGGGGATCAGATACGAGTACCAGCATTGTCACTGATGCAACTGCAAACCAATAA 3039 0.4255 MASSSSSPVLIALATASSVCVFLSCLVAVSSQDQNVTTDPSEARTLNSIFNKWSKSALQNEWNISGELCSGRAIDSITAIETLNPFIKCDCSSGSTCHITALRVYALDVVGEIPPELWTLTYLTNLKLDQNYLTGSLPPAIGNLTRMQYLSFGINSLSGELPKELGNLSELKLLALGSNNFSGSMPPELGKLVKLEQLYLDSSGLSGQIPPTFANLKNLATVWASDMELTGRIPDFIGNWSKLTALRFQGNSFEGPIPSSFVNLTSLTELRISEISNGSSSLAFIRNMKSLNVLVLRNNNISDSIPSNIGDFQNLKQLDLSFNNITGQIPTSFSNLSLLENLFLGNNKLSGTIPNQISPSLRNIDLSYNSLSGSLPSWVNQLNLLVNLVANNLTINYPDSSGLPKGLECLQRNFPCDRGHGRYSDFAIKCAGPPITTSDGTKYESEKEALGAATYFVTDTRRWAVSNVGLFTGSNNPLYNNSVGSQAAGTLDPELFQTARISASSLRYYGLGLENGAYNISLYFSELSILDTNTTWRSLGRRIFDIYIQGNRVLKDFNIKREAEGASFKAIQKDFRGIRVSENYLEIHLFWAGKGTCCIPAQGTYGPMISAIRARPEFTPTVSNRPPTNGKDRTGLIVGIVAGIGGVSFLFFLVVYCIIQRRTHHGGDDEELLGIDTKPYTFSHSELKNATDDFNPANKLGEGGFGPVYKGTLNDGRVTAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGHKRLLVYEYLENKSLDQALFGNCLTLNWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSDSNLEGEKIYLLEWAWQLHERNCIVELADPRLLSDFNEEEFKRIVGISLLCTQTSPSLRPAMSRVMAMLSGDMEVSTVSSRPGYLTDWKFDDEYTFMTGLATRGSDTSTSIVTDATANQ 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1547 1012 SUPERFAMILY Protein kinase-like (PK-like) 677 977 IPR011009 -
Lele29g1547 1012 CDD STKc_IRAK 700 962 - -
Lele29g1547 1012 ProSiteProfiles Leucine-rich repeat profile. 314 337 IPR001611 GO:0005515
Lele29g1547 1012 FunFam Os05g0263100 protein 43 277 - -
Lele29g1547 1012 Gene3D Phosphorylase Kinase; domain 1 668 769 - -
Lele29g1547 1012 Pfam Protein tyrosine and serine/threonine kinase 698 961 IPR001245 GO:0004672|GO:0006468
Lele29g1547 1012 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 993 - -
Lele29g1547 1012 Pfam Malectin domain 425 612 IPR021720 -
Lele29g1547 1012 FunFam Leucine-rich repeat receptor-like protein kinase 423 616 - -
Lele29g1547 1012 SMART serkin_6 694 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1547 1012 Gene3D Ribonuclease Inhibitor 305 410 IPR032675 -
Lele29g1547 1012 Gene3D Ribonuclease Inhibitor 202 304 IPR032675 -
Lele29g1547 1012 SUPERFAMILY L domain-like 97 407 - -
Lele29g1547 1012 FunFam Leucine-rich repeat receptor-like protein kinase 664 769 - -
Lele29g1547 1012 FunFam Putative LRR receptor-like serine/threonine-protein kinase 278 401 - -
Lele29g1547 1012 Gene3D Ribonuclease Inhibitor 41 201 IPR032675 -
Lele29g1547 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Lele29g1547 1012 ProSiteProfiles Protein kinase domain profile. 694 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1547 1012 Gene3D Transferase(Phosphotransferase) domain 1 770 974 - -
Lele29g1547 1012 FunFam Putative LRR receptor-like serine/threonine-protein kinase 770 974 - -
Lele29g1547 1012 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Lele29g1547 1012 Gene3D - 425 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1547 Lele-ChrLele29 22311768 22321701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1547 104 277 Receptor kinase-like Gene Family AT1G56120 27.011 1.31e-10 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g1547 PK_Tyr_Ser-Thr 3.5e-46 CL0016