Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1536 ATGGCTTCCTCAACCCAACCTGTTTCTACCGATGAGCCGGTTGTTACTGTGGATTGGCTTTATGCTAACCTTAAGGACCCTGACTTGAAGGTGCTGGATGCATCCTGGTACATGCCATATGAGCAGAGAAACCCCATTCAAGAATATAAGGCTGCACGCATTCCTGGAGCCCTTTTCTTTGATTTAGAAAGGATAGCAGATCTGACTACAGATTTGCCACATATGTTGCCATCAGAGGAAGCTTTCGCTGCTGCTGTGTCTGCTTTCCACATAGCAAACAAAGACCGTGTGGTTGTTTATGATGGCAAAGGAATATTTAGCGCACCTCGTGTTTGGTGGATGTTCCGAGCGTTTGGGCATGACAAAGTTTGGGTATTAGATGGTGGACTGCCAAAATGGCGTGCATCAGGATATGACAGTGAAACTAGTGCTTCTAGTGATGATATGTTAAAATCCAAAGCCGCCACCGAGGCAGTAGAGAAAGTATATCAGGGACAGACAGTTGCCCCAATCACATTTCAGACTAAACTTCAGCCGCATCTTGTTTGGTCCATGGAACAGGTGAGTTGCATTCTTTTAAGTGATAATTCTGCTTCCAATTTAAATGCACAAAATGCTGCTGACTGCTCAAGAATTTTCAAGGAAAGATGTATAAGAAAGGTAAAGAGTAACATTGGGGAAAAAAGCTACCAGCACATAGATGCACGATCAAAGCCTAGTTTAGCTCCACACATTTACTGTAAAATTGAACTTTTAGCTTTAGTTGGTCGTTTGGTGCATGAAATGGATTGGAAAATCTTACTTATGGGTGTCCAAAGAGATTGGAAGGCTTTGTTTGATGGAGTAGCACCGGAACCCCGAAAGGGTATCCAAAGTGGTCATATTCCTGGAAGCAAGTGCATTCCTTTCTTCCAGTTGTTGGATTCTTCACAGACACTGTTACCAGCAGATGAAATTAAGAAGCGAATTGATCAAGAAGGGGAAAAGGAAGAAGGGGAAAGTTACCTCCTTTGTGGCTTCCTGTATGTCATGTGCCCAACTGGACTTGGGGAAAACACGATGACTGGTAATCTTCTTGGAGAAATCAAAGAATTTACTGTTTTACTACTGTTTTCATAA 1119 0.4272 MASSTQPVSTDEPVVTVDWLYANLKDPDLKVLDASWYMPYEQRNPIQEYKAARIPGALFFDLERIADLTTDLPHMLPSEEAFAAAVSAFHIANKDRVVVYDGKGIFSAPRVWWMFRAFGHDKVWVLDGGLPKWRASGYDSETSASSDDMLKSKAATEAVEKVYQGQTVAPITFQTKLQPHLVWSMEQVSCILLSDNSASNLNAQNAADCSRIFKERCIRKVKSNIGEKSYQHIDARSKPSLAPHIYCKIELLALVGRLVHEMDWKILLMGVQRDWKALFDGVAPEPRKGIQSGHIPGSKCIPFFQLLDSSQTLLPADEIKKRIDQEGEKEEGESYLLCGFLYVMCPTGLGENTMTGNLLGEIKEFTVLLLFS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1536 372 CDD TST_Repeat_1 14 137 - -
Lele29g1536 372 Gene3D - 8 150 IPR036873 -
Lele29g1536 372 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 144 IPR036873 -
Lele29g1536 372 FunFam Sulfurtransferase 7 149 - -
Lele29g1536 372 SMART rhod_4 15 139 IPR001763 -
Lele29g1536 372 ProSiteProfiles Rhodanese domain profile. 25 142 IPR001763 -
Lele29g1536 372 Gene3D - 216 350 IPR036873 -
Lele29g1536 372 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 274 339 IPR036873 -
Lele29g1536 372 ProSiteProfiles Rhodanese domain profile. 275 339 IPR001763 -
Lele29g1536 372 Pfam Rhodanese-like domain 16 135 IPR001763 -
Lele29g1536 372 PANTHER THIOSULFATE SULFERTANSFERASE 10 349 IPR045078 GO:0016783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1536 Lele-ChrLele29 22181277 22186011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1536 4 350 Sulfurtransferasese or Rhodanese AT1G79230 55.908 2.16e-131 377