Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1504 ATGTTCCCTCCAAAGAAGGCTTCATCTATGAATTCTCAAGAGAGAGGCATGTGTGTTCAACCTGACTCTGGCCTCGTCCTCACCACTGATCCCAAGCCTCGCCTTCGCTGGACCGTCGAACTCCATGAACGCTTCGTCGATGCCGTCACACAGCTCGGAGGCCCTGACAAGGCAACACCGAAGACGATCATGAGGGTAATGGGTGTGAATGGTCTCACGCTTTACCATCTAAAGAGTCACCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGACTTCAATGATCATTCGATCAAGGATAGCATGGCAGGTGAGGCGACACTTCTTTCTAGGGTTCAGAAACATCTTCAGCTGAGGATTGAAGCTCAAGGGAAATACATGCAGAGCATATTAGAGAAGGCATATCAAACACTTGCAGGTGAAAATCTGAAGAACATTAATAATGGAGCTCATCATCATCAAACCAATATGATCCCTCAAGATTTCACTTCTTCGATCCCTCTGAATACTAATTTCCCTTCGTTTCAAGATCATCAGCTTGACATCTATGGTAGTGACCAGCTCGATCATCATCTTCATCACCATCATCAGTTCATGCCAAATAGCAGCAACATTTCTGAAAATCTGGGCATGGGGATGAATAATCATAATAATAAGAACAAGAGGCCTTTGATTTGGAACAATGATGAAGATCATCTGGGAACTGCATCTGCGTGCCTTGATACCGATGATCCTTTTAAGCAAGTTTCAATGGTGGATAGAACCTGCACCAGTTCTGATGAGAATAATAACATTAATAATGCTATTGATCCTATTTCAGCAATTTATGACACTAAGCCTTTGCTTCATCAAGTAGACGACACTTTAGGGGACACTATGACTGATCATAAGAAGCTTGCTCAAAGGCCATCGCAAAAAAGGGCACATTCCCTTCAACATGCAGATCAAAGGATGAGTCCTATGATTAGTACTGGTACACCACTTTAG 990 0.4333 MFPPKKASSMNSQERGMCVQPDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVNGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDSMAGEATLLSRVQKHLQLRIEAQGKYMQSILEKAYQTLAGENLKNINNGAHHHQTNMIPQDFTSSIPLNTNFPSFQDHQLDIYGSDQLDHHLHHHHQFMPNSSNISENLGMGMNNHNNKNKRPLIWNNDEDHLGTASACLDTDDPFKQVSMVDRTCTSSDENNNINNAIDPISAIYDTKPLLHQVDDTLGDTMTDHKKLAQRPSQKRAHSLQHADQRMSPMISTGTPL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1504 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 226 IPR044848 GO:0003700
Lele29g1504 329 Pfam MYB-CC type transfactor, LHEQLE motif 113 138 IPR025756 -
Lele29g1504 329 MobiDBLite consensus disorder prediction 296 329 - -
Lele29g1504 329 FunFam Myb family transcription factor 31 89 - -
Lele29g1504 329 Gene3D - 31 89 - -
Lele29g1504 329 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Lele29g1504 329 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Lele29g1504 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Lele29g1504 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1504 Lele-ChrLele29 21925106 21926825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1504 1 309 G2-like Transcription Factor Family AT1G79430 47.500 2.81e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele29g1504 Myb_DNA-binding 1.6e-06 CL0123