Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1498 ATGATCATGAAACTTCTGTTCTTCATCATTCTATTAGCAGCAGACAAGGCAGGAGAAGCTGAAGTTCAATCCCTCGCCGGCTGTCCCGACAAATGCGGGGACGTGGACATTCCATATCCATTTGGTGTGGGGGTACAACCTGGTACTTCTCGAAACTGTTTCTTGGGAAAATCATTCAATCTCACTTGTGACAACACCACATCCACCTTATACACAGGAAACGTCTCAGTTTCTAACATATCCTACCAACAAAATCGAATCGAAATCTCAGTCTCCGTCTCCAAGATTTGTCACAATATTAACAATCAATCAGGATCAGCAACTCCAGGCCTATCCCCTCGCCGTATTCTCACCCGTCCCTTCACCATTTCCAACACACAAAATAAGTTCATAACTTTTGGTTGCGACGCTCTGAGCATAATACAGTTCCAGAACAATTTAAGGGACAACTTCACCTATAACAGTGGTTGCGTGGCACTATGTGACCAACCTCCAAAAGATTTGACTGTTCAAACGTGTACAGGAACTGGGTGTTGCCAGGTGGATATACCTGAGGGAATGAATAATATCACTTATGTGGTAAATAGTGTCTATAATCATACCAAAGTGTTGGCCTTCAACAATTGTAGCTATGCTTTTGTTGCCAAACGTGATTGGTTTAGTTTCTCTCTCGATTATTTGAAATACTTTCCTTATAATAGAGTCCCACTTGTCCTAGATTGGACTGTTTCAAATGTTACTTGTGAAGCTGCTTCTGATAAGGAGGACTATGCCTGCAAATCAAACTCAGATTGTGTGGATTCCAGTTATGGAGTTGGATACAATTGCAGATGCAAACATGGCTTTGATGGAAATCCATATCATCCAGATGGTTGTCACGATGTTGATGAGTGTAGCAAATCCAATAACTGCAGTATGCCAAAGCAATGTCGCAATTTGGATGGTACTTACCGATGTTCTTGTCCACATGGATATAAAGGCGATGGCTACATTAATGGAACAGGCTGCACTTTGGACACACCTCAATCAGCCCATCATTTGCTTGTTCTTATAACCGCATTAGGCATTAGTGTTGGCTTGTTAGTTGTCTTTACGCTGGTCTCCACTCTATGCTGGGCACGCAAGCAAAGAACTTTGAAACAACTTAGACGAAAACATTTCGAGCAAAATGGAGGCAACTTATTGTTACAGCAACTTTCCCAACAGCAAGGGCACACTAATCACACAAAAATATTTACAGAAGTTGAGCTTAAGAACGCGACAAACAACTTTGATGAATCCAGAATCCTCGGTCGTGGGGGACAAGGAACAGTTTATAAGGGTATATTACTAGACAACAAACTCGTCGCCATTAAGAAGTCCAAAGTAGGAGGAAATCCTAGACAAATTAAGGATTTTATCAATGAAGTGTTTGTGCTTTCTCAAATCAACCATCGAAATGTGGTCAAACTTTTGGGGTGTTGTCTTGAAACTGATGTCCCTTTATTGGTATACGAGTTTGTAGACAATGGCACCCTTCTTGATCACATAGATCCTTTGAAGAATGAGTCTTCTATTCCATGGGAGATTCGATTGAGAATAGCTGCAGAAACTGCTGAGGCAATTTCATATTTACACTCTTCAGCTTCTATTCCAATTATACATCGAGATATTAAATCTACCAACATACTTTTAGACCATAATCTTAAAGCAAAGGTGTCTGATTTTGGAGCTTCAAAACTAGTTCCTCTTGATGAAACTCATGTTACCACTGTTGTACAAGGGACTCTTGGATACTTGGATCCAGAGTACCTCCACATAGGTCAGTTGAATGAGAAGAGTGATGTTTACAGCTTCGGGGTCGTGCTCGTGGAGTTACTCACCGCTAATAAAGCGGTTGAATTTAGCAGGCCGGAACAGAAAAATCTAGCAATGTATTTTGTGTCTTCAATGAAAGAAGACCATCTATGGAAGATTCTTGATAGACGAGTGCTGGATAGAAAGAATGCAAGTCAATTGAAGGAAGTGGCCTTATTGGCAAGGAGGTGTGTAAGAGTAAAAGGAGAGGAAAGGCCCACTATGAAGGAAGTAGCAAAGGAACTAGAAGGAATGATTGCAATGGAGAAGCAGCATGCTTGGGTGAAAAGTGAAGATGTTATGTCAGAAGAAAGTGAATACTTACTTGGTCATGTGACTGATGTATGTAGGGTATCAATGGGGGCTAGTACTTCAGCTTCCTATGAAAGCATAGTGAAGGAGATTGCATCAGAGATTGCAGATGGACGATGA 2268 0.4114 MIMKLLFFIILLAADKAGEAEVQSLAGCPDKCGDVDIPYPFGVGVQPGTSRNCFLGKSFNLTCDNTTSTLYTGNVSVSNISYQQNRIEISVSVSKICHNINNQSGSATPGLSPRRILTRPFTISNTQNKFITFGCDALSIIQFQNNLRDNFTYNSGCVALCDQPPKDLTVQTCTGTGCCQVDIPEGMNNITYVVNSVYNHTKVLAFNNCSYAFVAKRDWFSFSLDYLKYFPYNRVPLVLDWTVSNVTCEAASDKEDYACKSNSDCVDSSYGVGYNCRCKHGFDGNPYHPDGCHDVDECSKSNNCSMPKQCRNLDGTYRCSCPHGYKGDGYINGTGCTLDTPQSAHHLLVLITALGISVGLLVVFTLVSTLCWARKQRTLKQLRRKHFEQNGGNLLLQQLSQQQGHTNHTKIFTEVELKNATNNFDESRILGRGGQGTVYKGILLDNKLVAIKKSKVGGNPRQIKDFINEVFVLSQINHRNVVKLLGCCLETDVPLLVYEFVDNGTLLDHIDPLKNESSIPWEIRLRIAAETAEAISYLHSSASIPIIHRDIKSTNILLDHNLKAKVSDFGASKLVPLDETHVTTVVQGTLGYLDPEYLHIGQLNEKSDVYSFGVVLVELLTANKAVEFSRPEQKNLAMYFVSSMKEDHLWKILDRRVLDRKNASQLKEVALLARRCVRVKGEERPTMKEVAKELEGMIAMEKQHAWVKSEDVMSEESEYLLGHVTDVCRVSMGASTSASYESIVKEIASEIADGR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1498 755 FunFam Wall-associated receptor kinase 2 246 292 - -
Lele29g1498 755 FunFam Wall-associated receptor kinase 2 501 718 - -
Lele29g1498 755 Gene3D Transferase(Phosphotransferase) domain 1 501 719 - -
Lele29g1498 755 SMART egf_5 297 337 IPR000742 -
Lele29g1498 755 SMART egf_5 247 293 IPR000742 -
Lele29g1498 755 Pfam Calcium-binding EGF domain 294 326 IPR001881 GO:0005509
Lele29g1498 755 ProSiteProfiles EGF-like domain profile. 294 328 IPR000742 -
Lele29g1498 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Lele29g1498 755 SMART egfca_6 294 337 IPR001881 GO:0005509
Lele29g1498 755 SUPERFAMILY EGF/Laminin 294 329 - -
Lele29g1498 755 Gene3D Phosphorylase Kinase; domain 1 396 500 - -
Lele29g1498 755 Gene3D Plasmodium vivax P25 domain 238 341 - -
Lele29g1498 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 310 321 IPR000152 -
Lele29g1498 755 Pfam Wall-associated receptor kinase galacturonan-binding 28 89 IPR025287 GO:0030247
Lele29g1498 755 SUPERFAMILY Protein kinase-like (PK-like) 405 695 IPR011009 -
Lele29g1498 755 ProSitePatterns Calcium-binding EGF-like domain signature. 294 319 IPR018097 GO:0005509
Lele29g1498 755 CDD EGF_CA 294 328 - -
Lele29g1498 755 CDD STKc_IRAK 430 697 - -
Lele29g1498 755 FunFam Fibrillin 2 293 332 - -
Lele29g1498 755 ProSiteProfiles Protein kinase domain profile. 424 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1498 755 SMART serkin_6 424 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1498 755 FunFam Wall-associated receptor kinase 2 394 500 - -
Lele29g1498 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 287 IPR045274 GO:0007166
Lele29g1498 755 Pfam Protein kinase domain 425 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1498 Lele-ChrLele29 21842183 21845689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1498 1 755 Receptor kinase-like Gene Family AT1G21230 44.329 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele29g1498 Pkinase 1.8e-47 CL0016