Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1487 ATGAAAGGTTTGCCAGTGGGTGATCAGATTGACAAAGCATGTGGTTCCCCAAGGCATCTCAAAAAGCCAAACCAGCAAGCTGCAAAAAAGACATCTGAAACCCAGAAATTAGAATTACCCATCAAGAAGACGATGATGTCTGCAAATCCTGATCCTCAAGCTACCTCATCTACAGTAACCACAGGCCTCACAAGGGGTCTTCCTTCGCCTTCAAGGACCACCAATAACCATGGCTATGGAAGTGGCAATAGTTCTCGTAGTGACAGCTTAGAAAGCACAAGTAGTGCTAGTGCACCCATTAAGCCACATACTGGTGGCGATGTAAGGTGGGATGCCATTAACATGGTTTCTAGAGGATCCCCTCTTGATCTTAGCCATTTTCGGCTTCTGAAGCGAATCGGCTATGGGGATATTGGGAGTGTGTATCTTGTTGAACTCAGAAGAACAAGGACTTATTTTGCCATGAAAGTGATGAACAAGGCAGCTCTTATAAGTAGGAATAAACTACTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTTGACCACCCTTTCTTACCAACTCTGTATTCTTACTTTGAAACTGATAAGTTCTATTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAACCTTCACTCTCTTCGTCAGAAGCAGCCAAACCAGCATTTCACAGAAGAAGCAGCACGGTTTTATGCTTCAGAGATATTGTTAGCTCTTGAGTACCTGCATATGCTAGGCATAGTGTATAGAGACTTGAAGCCAGAGAATGTGTTAGTCAGAGATGAGGGCCATATAATGCTCTCAGATTTCGATCTATCCCTTCGTTGCACGGTCAATCCTACGCTCATCAAGTCTTCATCTGCCCATGTAAGTGGTAGCAGCAACAGCAGCAGCAGTGGTGGTTCTGGGATCATTTTGGATGACCAGCAAACAGTGCAGGGTTGTATCCAGGTCCAGCCATCAACTTTCTTCCCGCGTATTTTACCATCGAAGAAAAACCGAAAGTCAAAGTCAGATTTCGGCCTCACAAACGGAGGAGCTGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATACCTTGCACCTGAAATCATCAGAGGAGAAGGTCATGGCAGTGCAGTAGATTGGTGGACTTTCGGGATCTTCTTGTACGAGCTTTTACACGGTACAACGCCCTTCAAAGGCGCCGGAAATAGGGCTACACTTTTCAATGTTGTAGGACAGCCCTTAAGGTTCCCAGACACTCCCCAGATAAGTTCTGCAGCAAAAGACCTTATCAAAGGATTGCTAGTGAAGGAACCTCCAAAGCGCATTGCATACATAAGGGGTGCCACAGAAATAAAACAGCATCCATTTTTTGAGGGAGTGAACTGGGCTCTAGTTAGAAGTGCCCTGCCTCCTCATATACCAGATCCTGTAGATTTTACTAAGTATGCTAGCAACGAATCAGCAGACAAGGTTATGGATATTGCAAAAGATAAAAACGGTCCAAAAGGTCCCTCTAATTCTTCTTACATGGATTTTGAGTATTTTTAA 1572 0.4472 MKGLPVGDQIDKACGSPRHLKKPNQQAAKKTSETQKLELPIKKTMMSANPDPQATSSTVTTGLTRGLPSPSRTTNNHGYGSGNSSRSDSLESTSSASAPIKPHTGGDVRWDAINMVSRGSPLDLSHFRLLKRIGYGDIGSVYLVELRRTRTYFAMKVMNKAALISRNKLLRAQTEREILQLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNQHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCTVNPTLIKSSSAHVSGSSNSSSSGGSGIILDDQQTVQGCIQVQPSTFFPRILPSKKNRKSKSDFGLTNGGAALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPDTPQISSAAKDLIKGLLVKEPPKRIAYIRGATEIKQHPFFEGVNWALVRSALPPHIPDPVDFTKYASNESADKVMDIAKDKNGPKGPSNSSYMDFEYF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1487 523 FunFam Serine/threonine-protein kinase AGC1-7 358 483 - -
Lele29g1487 523 MobiDBLite consensus disorder prediction 1 103 - -
Lele29g1487 523 ProSiteProfiles Protein kinase domain profile. 127 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1487 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Lele29g1487 523 Pfam Protein kinase domain 128 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1487 523 Pfam Protein kinase domain 339 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1487 523 FunFam Serine/threonine-protein kinase D6PK-like 125 210 - -
Lele29g1487 523 MobiDBLite consensus disorder prediction 502 523 - -
Lele29g1487 523 Gene3D Transferase(Phosphotransferase) domain 1 211 279 - -
Lele29g1487 523 PANTHER FLIPPASE KINASE 1-RELATED 37 491 - -
Lele29g1487 523 SMART serkin_6 127 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1487 523 Gene3D Phosphorylase Kinase; domain 1 125 210 - -
Lele29g1487 523 Gene3D Transferase(Phosphotransferase) domain 1 340 483 - -
Lele29g1487 523 CDD STKc_phototropin_like 125 486 - -
Lele29g1487 523 MobiDBLite consensus disorder prediction 48 100 - -
Lele29g1487 523 SUPERFAMILY Protein kinase-like (PK-like) 124 492 IPR011009 -
Lele29g1487 523 FunFam serine/threonine-protein kinase D6PK-like 211 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1487 Lele-ChrLele29 21753733 21755974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1487 81 523 AGC Kinase Gene Family AT3G12690 71.806 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele29g1487 Pkinase 3.6e-38 CL0016