Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1454 ATGGGCTTCTTTTCTCACAAGTATGTTCCTTTAGTTATCCACATCCTCTTACTCTGTATATCATCATCTCCCGCTCTAGACATCACCACAGATACAGAAGCTTTGATCTCGCTTAAGTCTCAATTGAGTAATATCGATTCTCTTCACCCTTTATCTTCTTGGAATCACAGTTCATCATCACCCTGCAACTGGTATGGTGTAACCTGCAACAGACTTCAACAAAGAGTTATAGACTTGAATCTTTCAGGCTTAAGACTCTCAGGTCAGTTAAGTCCTAGTATAGGTAATCTCTCATTTCTTGAGTCCCTCCAGTTGCAGGGAAACCAATTCACAGGAGTGATTCCTGACCAAATTGGCCATCTGCTGCGGTTAAGAGTTCTAGACTTGAGCTATAACAGAATAGAGGGCTTGATTCCTTCAAACATCACTCGCTTGGCGAACCTCGAGACACTTAACCTATCCTTCAACTATATAGTCAGCCAAATTCCTCAAGATATTGACAGCTTGACAGAGCTTCGAGTCTTGAGATTGGGAAGCAATAGATTGTATGGTGTAGTTCCACCAACTCTTGGCAACATTTCATTTCTCACAAATATCAGTTTTGGCACAAACGGTCTTAGAGGAGGGATTCCCAATGAACTGGGCAGGCTCAAGAACTTAATTGAGCTTGATCTCACTATTAACAATCTCAATGGGACTATTCCTTCTTCTATATATAACTTATCTTCCCTACTTAACTTGGCTGTCGCTGCCAATGATTTTTGGGGTGACATTCCTCAGGATGTTGGTCACAGACTGCCAAAACTTCTAGTCTTCAACATCTGCATTAATAGATTCACTGGTAGAATTCCTTGGTCTTTGCACAATCTCACCAACATTCGAGTTATTCGCATGGCTTCCAACCTTTTGGAAGGAACTGTGCCACCAGGTCTTGGAAATCTCCCCTACCTTCGTATGTACAATATAGGGTATAATAGGATAGTTAGCTCAGAAGATAGAGGCCTGGACTTCATTACTTCATTGGCAAACAGCACCTTCTTGAACTTTCTTGCAATTGATGGCAATAGGTTCGAAGGTGTAATTCCAGACACCATTGGAAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGGGAATCGTTTCCATGGAAACATACCCCCCTCCATTGGAAATCTTAGAGGCTTGAGTTTATTAAACTTGAGTCACAACGCAATCTCAGGAGAAATTCCTTTCGAGTTAAGCCAACTGGAGGAACTGCAAGAGCTCAGTCTGGCCGGGAATAAGATATCTGGAAGCATTCCAAACTCCCTTGGCCGTCTCCAAAAGCTGAACAGACTTTATTTGTCAAGCAATCAGCTTGTCGGTGAAATACCTTCAAGTTTTGGGAATTTTCAGAACATTGCCTTCATGGACTTATCCCACAACAAGCTCAATGGAAGCATACCTAGAGAAGTACTCAGTCTCTCGTCTCTGAGCGATGTTTTAAACGTGTCTCACAACCTTTTAAGTGGTTCTTTGCCTCAAGAAGTAGGGAGTTTGATCAGAGTTTCTACCTTAGACTTCTCTGACAACCTTTTAGTTGGTGAAGTCCCCAGCTCAATCAGCAATTGTCTAAGCCTAGAAAAGCTATTTTTGGCACGTAATATGCTTTCAGGTCACATTCCAAAAGCTCTTGGGGGAATTAAAAGCTTGGAAATTCTAGACCTTTCCACCAACCAAATCTCTGGATCCATTCCTGTTGAACTTCAAAATCTAAATGCCCTTCAGTTATTGAACCTTTCGTATAATGACTTAGAAGGAGTCATTCCCAGTGGTGGAGTTTTCACAAATCTCTCTTCTTTCCATTTTGAAGGGAATAAGAAACTATGTTTACTTTCCTCATGTGCTAATCAAAGACATGGGAGAAAGATGCTCATAATTTATATCGCCATAGCTATTGTGGCAACATTGAAACTATGTTTCGCTATTGGCTTGCTGTTGTATGTGAGGAGCAGAAAAACAAAGGCAATAACACCACTTGAAGTGGCAAAGCCATCTCATCCAATGGTCTCTTATGATGAGCTTCAACGAGCAACTGGAAACTTCAGCCAAGAAAATTTACTAGGAATTGGAAGCTTTGGTTCGATCTATAGAGGCTATCTTAGTGAAGGGAATGCTGTTGCAGTAAAAGTCCTAGATACTTCAAGATCAGCCTCCTTGAAGAGTTTCTTTGCAGAATGTGAGGCTTTAAGGAATGTAAGGCATCGAAATCTGGTTAAGCTAATCACATCATGTTCTAGTATAGACTTTAAGAACAAGGAATTTCTTGCTTTGGTTTATGAATTCATGTCTAACGGCAACTTGGAAGATTGGATCAAGGGAAAGATAAAGCACGCAAATGGGAATGGGTTGAATCTTTCGGAGAGACTGAACATTGCCATTGATGTTGCTTGTGCAATGGAATATCTGCACGATGACAGTGAAACTCCTATTGTGCATTGTGATTTGAAGCCAAGCAATATTCTGTTGTGTGAAGATATGACTGCAAAGTTAGGAGATTTTGGATTGGCTAGGCTTATAATTGAAAGACCAACTAATCATGTCTCAATAAGCTTCACTCATGTCCTAAGGGGTTCAATCGGTTACATACCTCCAGAGTATGGATGGGGAGAAAAACCATCAATAGCAGGAGATGCGTACAGTTTTGGAATTATGTTGCTTGAGCTCTTTACAGGGAGGAGCCCAACAGATGATAGCTTCACGGGTGGCCTGAACTTAACAAGATGGGTGCAGTCAGCATTCTCAGATAAGACTGTGCAAGTCATAGACCCTCAGCTTCTGTCACACATTTTTCACAATGAGCTTGCTGATAAAGATCCCAATCTACAACTTGATTGTGTGAATGGAGTTCTGGGAGTTGGCTTATCCTGCACTGCAGAATCTCCAGATGGACGCCTAAAGATGAAAGATGCTGTTGCCAAATTACAAGTTGTCGGAGATAATCTTTCAAAACTCAAGCAAAACAAGGGCCCTTCAAGCAATAGTTTTGTTTAG 3036 0.4117 MGFFSHKYVPLVIHILLLCISSSPALDITTDTEALISLKSQLSNIDSLHPLSSWNHSSSSPCNWYGVTCNRLQQRVIDLNLSGLRLSGQLSPSIGNLSFLESLQLQGNQFTGVIPDQIGHLLRLRVLDLSYNRIEGLIPSNITRLANLETLNLSFNYIVSQIPQDIDSLTELRVLRLGSNRLYGVVPPTLGNISFLTNISFGTNGLRGGIPNELGRLKNLIELDLTINNLNGTIPSSIYNLSSLLNLAVAANDFWGDIPQDVGHRLPKLLVFNICINRFTGRIPWSLHNLTNIRVIRMASNLLEGTVPPGLGNLPYLRMYNIGYNRIVSSEDRGLDFITSLANSTFLNFLAIDGNRFEGVIPDTIGNLSKVLSKLYMGGNRFHGNIPPSIGNLRGLSLLNLSHNAISGEIPFELSQLEELQELSLAGNKISGSIPNSLGRLQKLNRLYLSSNQLVGEIPSSFGNFQNIAFMDLSHNKLNGSIPREVLSLSSLSDVLNVSHNLLSGSLPQEVGSLIRVSTLDFSDNLLVGEVPSSISNCLSLEKLFLARNMLSGHIPKALGGIKSLEILDLSTNQISGSIPVELQNLNALQLLNLSYNDLEGVIPSGGVFTNLSSFHFEGNKKLCLLSSCANQRHGRKMLIIYIAIAIVATLKLCFAIGLLLYVRSRKTKAITPLEVAKPSHPMVSYDELQRATGNFSQENLLGIGSFGSIYRGYLSEGNAVAVKVLDTSRSASLKSFFAECEALRNVRHRNLVKLITSCSSIDFKNKEFLALVYEFMSNGNLEDWIKGKIKHANGNGLNLSERLNIAIDVACAMEYLHDDSETPIVHCDLKPSNILLCEDMTAKLGDFGLARLIIERPTNHVSISFTHVLRGSIGYIPPEYGWGEKPSIAGDAYSFGIMLLELFTGRSPTDDSFTGGLNLTRWVQSAFSDKTVQVIDPQLLSHIFHNELADKDPNLQLDCVNGVLGVGLSCTAESPDGRLKMKDAVAKLQVVGDNLSKLKQNKGPSSNSFV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1454 1011 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 340 990 - -
Lele29g1454 1011 SUPERFAMILY Protein kinase-like (PK-like) 675 991 IPR011009 -
Lele29g1454 1011 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Lele29g1454 1011 ProSitePatterns Protein kinases ATP-binding region signature. 702 724 IPR017441 GO:0005524
Lele29g1454 1011 CDD STKc_IRAK 702 990 - -
Lele29g1454 1011 SMART LRR_sd22_2 417 432 - -
Lele29g1454 1011 SMART LRR_sd22_2 441 467 - -
Lele29g1454 1011 SMART LRR_sd22_2 562 588 - -
Lele29g1454 1011 SMART LRR_sd22_2 121 150 - -
Lele29g1454 1011 SMART LRR_sd22_2 169 195 - -
Lele29g1454 1011 SMART LRR_sd22_2 217 243 - -
Lele29g1454 1011 Gene3D Transferase(Phosphotransferase) domain 1 777 1007 - -
Lele29g1454 1011 ProSiteProfiles Leucine-rich repeat profile. 147 170 IPR001611 GO:0005515
Lele29g1454 1011 Gene3D Ribonuclease Inhibitor 262 331 IPR032675 -
Lele29g1454 1011 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 227 333 - -
Lele29g1454 1011 SUPERFAMILY L domain-like 371 626 - -
Lele29g1454 1011 SUPERFAMILY L domain-like 30 328 - -
Lele29g1454 1011 SMART serkin_6 696 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1454 1011 FunFam LRR receptor-like serine/threonine-protein kinase EFR 334 634 - -
Lele29g1454 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Lele29g1454 1011 SMART LRR_typ_2 586 611 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 169 192 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 489 514 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 217 241 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 121 141 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 290 314 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 441 464 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 562 585 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 97 120 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 417 440 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 145 168 IPR003591 -
Lele29g1454 1011 SMART LRR_typ_2 393 414 IPR003591 -
Lele29g1454 1011 ProSiteProfiles Leucine-rich repeat profile. 123 144 IPR001611 GO:0005515
Lele29g1454 1011 Pfam Leucine Rich Repeat 443 465 IPR001611 GO:0005515
Lele29g1454 1011 PRINTS Leucine-rich repeat signature 124 137 - -
Lele29g1454 1011 PRINTS Leucine-rich repeat signature 562 575 - -
Lele29g1454 1011 FunFam LRR receptor-like serine/threonine-protein kinase EFR 667 776 - -
Lele29g1454 1011 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Lele29g1454 1011 Pfam Leucine rich repeat 100 158 IPR001611 GO:0005515
Lele29g1454 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 777 1002 - -
Lele29g1454 1011 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Lele29g1454 1011 Gene3D Ribonuclease Inhibitor 332 632 IPR032675 -
Lele29g1454 1011 FunFam Leucine-rich repeat receptor-like protein kinase 28 188 - -
Lele29g1454 1011 Gene3D Ribonuclease Inhibitor 192 261 IPR032675 -
Lele29g1454 1011 ProSiteProfiles Leucine-rich repeat profile. 564 587 IPR001611 GO:0005515
Lele29g1454 1011 Pfam Protein kinase domain 697 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1454 1011 ProSiteProfiles Protein kinase domain profile. 696 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1454 1011 Gene3D Phosphorylase Kinase; domain 1 677 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1454 Lele-ChrLele29 21215508 21218757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1454 30 998 Receptor kinase-like Gene Family AT3G47570 42.327 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele29g1454 Pkinase 3.3e-39 CL0016