Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1453 ATGGGCTCCTTTTCTCAACCATCGCATTATTTTGCATTATATATTATTCCTTTAGCTATCCTTTGCCTTTTCATCAGCATATCATCATCAACTGCTCTAGACATCACCACAGATACTGAAGCTTTGATCTCATTTAAGTCTCAGTTGAGTAATATCGACACTCCTCACCCTTTATCTTCTTGGAACCAGAGTTCATCATCACCATGCAACTGGTATGGTGTAACCTGTAATAGGTTTGGCCACAGAGTGATAGGCTTGAATCTCTCGAGCTTAAGACTCTCAGGTCAGTTAAGCCCTCATGTAGGTAACCTCACTTTTCTTAAGTCCCTCCAGTTGCAGGATAACCAGTTTGAAGGGGTGATTCCTGAGCAAATTGGCCATCTCATTCGGTTAAGAGCTCTAGACTTGAGCTCTAACAGAATAGAGGGTATGCTTCCTTCAAACATCACTCGCTTGGCCAACCTTGTGACACTCAACTTATCCTTCAACTATATAGTCAGCCAAATTCCTCAAGATATTGACAGCTTGACAGAGCTTCGAGTCTTGAGATTGGGAAGCAATAGATTGTATAGTGCTATTCCACCAACTCTTGGGAACGTTTCATCTCTCACAAATATTAGTTTCGGCACAAACAGTCTAAGTGGTGGGATTCCCAGTGAATTAGGAAGGCTCAAGAACTTAATTGAGCTTGATCTCACTATTAACAATCTCACGGGGACTATTCCTTCTTCTATATATAACTTATCTTCCCTAGTTAACTTGGCTGTTGCTGCCAACGATTTTTGGGGTGACATTCCTCAGGATGTTGGTCACAGACTTCCAAAACTTCTAGTCTTCAATTTCTGCTTTAATAGATTCACTGGTAGAATTCCTTGGTCTTTGCACAATCTCACCAACATTCGAGTTATTCGCATGGCTTCCAACCTTTTGGAAGGAACTGTGCCACCAGGTCTTGGAAATCTCCCCTACCTTCGTATGTACAATATAGGGTATAATAGGATAGTTAGCTCAGAAGATAGAGGCCTGGACTTCATTACTTCATTGGCAAACAGCACCTTCTTGAACTTTCTTGCAATTGATGGCAATAGGTTCGAAGGTGTAATTCCAGACACCATTGGAAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGGGAATCGTTTCCATGGAAACATACCCTCCTCAATTGGAAATCTTAGAGGCTTGAGTTTACTAAACTTGAGTCACAACGCAATCTCAGGAGAAATTCCTTTCGAGTTAAGCCAACTGGAGGAACTGCAAGAGCTCAGTCTCGCCGGGAATCAGATATCTGGAAGTATTCCAAACTCCCTTGACCGACTCCAAAAGCTGAACAGACTTTATTTGTCAAGCAATCAGCTTGTGGGTGAAATACCTTCAAGTTTTGGGAATTTTCAGAGCATTCTCTCAATGGACTTATCTCACAACAAGCTTAATGGAAGCATACCTGGAGCAGTTCTAAGTCTCTCATCTCTCACCACTGTTTTAAACGTGTCTAAGAACTTTTTAAGTGGATCTTTGCCTCAACAAGTAGGGAGTTTGATCAGAGTTTCTACCTTAGACTTCTCTGACAACATTTTAGTTGGTGAAATTCCCACCTCAATGGGCAGTTGTCTAAGCCTAGAAAAGCTATTTTTGGCACGAAATATGCTTTCAGGTCCTATTCCAAAAGCTCTTGGGGTCATTAGAGGCTTGGAAATTCTAGACCTTTCCACCAACCAACTCTCTGGATCCATTCCTGGCGAACTTCAAAATCTAAAAGCCCTTCAGTTACTGAACCTTTCTTATAATGACCTAGAAGGAGTCATCCCCAGTGGTGGAGTTTTCACAAATCTCTCTTCTTTCCATTTTGAAGGCAATAAGAAACTATGTTTACTTTCCACATGTGCTAATCAAAGAAATGGGAGAAAGATGCTCATAATTTATATCACCATAGCTATTGTGGCTACATTGATAGTATGTTTCACAATTGGCTTGCTGTTGTATAAGAGGAACAGAAAATCGAAGTCAACAACACCATTTGAAATGGCAAAGCCAAATCATCCGATGGTCTCGTATGATGAGCTTCGACGAGCCACTGGGGACTTCAGCCTAGAAAATTTACTTGGAACTGGAAGCTTTGGTTCGGTCTACAGAGGCTATCTCGGTGAAGGGGGTACTAGTACTAGTGTTGCAGTAAAAGTACTAGATACTTTAAGGACAGGCTCCTTGAAGAGTTTCTTTGCAGAATGTGAGGCTTTGAAGAATGTAAGGCATCGAAATCTGGTTAAGCTAATCACATCATGTTCAAGCATAGACTTCAAGAACAATCAATTTCTGGCTTTGGTTTATGAGTTCATATGTAATGCCAACTTGGATAATTGGATTAAGGGAACGAGAAAGCATGCAAATGGAAATGGGTTGAATCTTGTGGAGAGATTGAACATTGCTATTGATGTTGCTTGTGCATTGGATTATCTGCACAATGACACTGAAACTCCTATTGTCCATTGTGATTTGAAGCCTAGCAATATTCTTCTGTGTGAAGATATGACTGCAAAGGTGGGAGACTTTGGGTTGGCTAGAGTGTTGATTGAAAGACCAACTAATCAAGTCTCAATAAGCTCCACCCATGTTCTCAAAGGGTCAATCGGTTACATACCTCCAGAATATGGATGGGGAGAAAAGCCATCAGTAGCAGGAGATACATACAGTTTTGGGATTGTGTTGTTAGAGCTCTTTACTGGGAGGAGCCCAAGAGATGATAGCTTCACAGGTGGCCTGAGCTTAACAAGATGGGTTCAATCAGCATTCCCAGACAAGACTGTGCAAATCATAGATCCTCAGCATCTGTCACACATTTTTCCCAATGAGCTTGCTGATAAATATCCCAATCTACAACTTGATTGTGTGAATGGAGTTCTGGGAGTTGGCTTATCCTGCACTGCAGAATCTCCAGATGGACGCCTAAAGATGAAAGATGCTGTTGCCAAATTACAAGTTGTCAGAGATAATCTTTCAAAACTCAAGCAAAAGAAGGGCCCTTCAAGCATTAGTTTTGTTTAG 3066 0.4123 MGSFSQPSHYFALYIIPLAILCLFISISSSTALDITTDTEALISFKSQLSNIDTPHPLSSWNQSSSSPCNWYGVTCNRFGHRVIGLNLSSLRLSGQLSPHVGNLTFLKSLQLQDNQFEGVIPEQIGHLIRLRALDLSSNRIEGMLPSNITRLANLVTLNLSFNYIVSQIPQDIDSLTELRVLRLGSNRLYSAIPPTLGNVSSLTNISFGTNSLSGGIPSELGRLKNLIELDLTINNLTGTIPSSIYNLSSLVNLAVAANDFWGDIPQDVGHRLPKLLVFNFCFNRFTGRIPWSLHNLTNIRVIRMASNLLEGTVPPGLGNLPYLRMYNIGYNRIVSSEDRGLDFITSLANSTFLNFLAIDGNRFEGVIPDTIGNLSKVLSKLYMGGNRFHGNIPSSIGNLRGLSLLNLSHNAISGEIPFELSQLEELQELSLAGNQISGSIPNSLDRLQKLNRLYLSSNQLVGEIPSSFGNFQSILSMDLSHNKLNGSIPGAVLSLSSLTTVLNVSKNFLSGSLPQQVGSLIRVSTLDFSDNILVGEIPTSMGSCLSLEKLFLARNMLSGPIPKALGVIRGLEILDLSTNQLSGSIPGELQNLKALQLLNLSYNDLEGVIPSGGVFTNLSSFHFEGNKKLCLLSTCANQRNGRKMLIIYITIAIVATLIVCFTIGLLLYKRNRKSKSTTPFEMAKPNHPMVSYDELRRATGDFSLENLLGTGSFGSVYRGYLGEGGTSTSVAVKVLDTLRTGSLKSFFAECEALKNVRHRNLVKLITSCSSIDFKNNQFLALVYEFICNANLDNWIKGTRKHANGNGLNLVERLNIAIDVACALDYLHNDTETPIVHCDLKPSNILLCEDMTAKVGDFGLARVLIERPTNQVSISSTHVLKGSIGYIPPEYGWGEKPSVAGDTYSFGIVLLELFTGRSPRDDSFTGGLSLTRWVQSAFPDKTVQIIDPQHLSHIFPNELADKYPNLQLDCVNGVLGVGLSCTAESPDGRLKMKDAVAKLQVVRDNLSKLKQKKGPSSISFV 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1453 1021 Gene3D Ribonuclease Inhibitor 344 640 IPR032675 -
Lele29g1453 1021 Gene3D Transferase(Phosphotransferase) domain 1 788 1017 - -
Lele29g1453 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Lele29g1453 1021 FunFam Inactive leucine-rich repeat receptor-like protein kinase 346 640 - -
Lele29g1453 1021 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 234 341 - -
Lele29g1453 1021 ProSitePatterns Protein kinases ATP-binding region signature. 709 734 IPR017441 GO:0005524
Lele29g1453 1021 SUPERFAMILY Protein kinase-like (PK-like) 677 1001 IPR011009 -
Lele29g1453 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 786 - -
Lele29g1453 1021 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Lele29g1453 1021 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Lele29g1453 1021 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515
Lele29g1453 1021 PANTHER OS04G0122200 PROTEIN 222 1010 - -
Lele29g1453 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 787 1012 - -
Lele29g1453 1021 SUPERFAMILY L domain-like 36 335 - -
Lele29g1453 1021 SMART LRR_typ_2 128 151 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 424 447 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 496 521 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 400 421 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 297 321 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 224 248 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 569 592 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 176 200 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 448 471 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 152 175 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 593 618 IPR003591 -
Lele29g1453 1021 SMART LRR_typ_2 104 127 IPR003591 -
Lele29g1453 1021 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Lele29g1453 1021 Pfam Leucine Rich Repeat 450 472 IPR001611 GO:0005515
Lele29g1453 1021 SMART serkin_6 703 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1453 1021 SUPERFAMILY L domain-like 354 633 - -
Lele29g1453 1021 ProSiteProfiles Protein kinase domain profile. 703 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1453 1021 Pfam Protein tyrosine and serine/threonine kinase 705 925 IPR001245 GO:0004672|GO:0006468
Lele29g1453 1021 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Lele29g1453 1021 Gene3D Phosphorylase Kinase; domain 1 665 786 - -
Lele29g1453 1021 Gene3D Ribonuclease Inhibitor 34 193 IPR032675 -
Lele29g1453 1021 Gene3D Ribonuclease Inhibitor 194 343 IPR032675 -
Lele29g1453 1021 Coils Coil 992 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1453 Lele-ChrLele29 21208851 21212069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1453 37 1008 Receptor kinase-like Gene Family AT3G47570 41.825 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele29g1453 PK_Tyr_Ser-Thr 8.4e-38 CL0016