Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1441 ATGATGGAGCTTGGCTTGAGCTTAGGAGCTTCGAAGCCTTTCACTTTCATGGAAAAGCCTTCTGAATTACCAGCTGATCTGAACACTACCTTATCGATTGGTCCAATCACTACCACCATCAGCAAAAGCCGTGAAGAAGAGGACGAAGAAGATCATCATCAAGAAGAAGCAGCCAACAAGAAGGAAAATAACACTACTACTGTGAAAGAAGATCATGAAGCTTCAACTTATAAACACTCTTCTGCTTCTCTTTCCTCTTCTTCCAAATCCAACAACAACAACTCCTTACAGCTTCATCTTCTTCCTCATCACTCCAATCCTGTACCTCTCTCTTCCTTCTCATGGCATCCTCCTTCTGACAACTGTGATGAGGTGGGAGGTAATTCAGGGAGGGCTTTGAAGGTGAAGACGAAGGCAGAGGAGGAAGAGTCGGAGGAGAGGACGGTGGTGTCGTCGTCTCCGATGAGCGGGGCGTCGTCGTTTCCGGTGGATCTGTGTATATACAGTAGTAATAATACTAATAATAAAGGATCATCAGGGAATAATTACAATAGCAGAAAGAGGCTGCAGAATAATAATGAATCAGAAGGTGAAGCAGGTAATTATAATTACTACGATCAAAGAGGTTGTTCATCAAGAGCAAGCGATGAAGACGACAACAACAACAACGTTGGTGGTGTTAGTGGTTGTGGTACCAGAAAGAAGCTCAGGCTCTCTAAAGAACAATCTGCTTTTCTTGAAGAAAGCTTCAAGGAACACAGTACTCTTAATCCTAAACAAAAAGTTGCTCTTGCCAAACAACTCAATCTTCGTCCTCGCCAAGTCGAAGTCTGGTTTCAAAACCGAAGAGCAAGGACGAAGCTGAAGCAGACGGAGGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACGCTATCAGAAGAGAATAGGAGGCTGCAGAAGGAGCTTCAAGAACTGAGAGCTTTGAAGGCTTCAAACTCGAACCCTTTCTTCATGAAATTACCTGCCACCACCTTAACCATGTGCCGTTCCTGTGAGCGCGTTGCACCCAATAATTCCTCCTCCAATAATAATAATAATTCTGCTTCTTCTTCTAAGCCCACAATTTCCTTCCCCTTCGCCAAACCCAAGTTCTATCCTTTTCCTCACTCCAAACCACACCAGTCTTGA 1170 0.441 MMELGLSLGASKPFTFMEKPSELPADLNTTLSIGPITTTISKSREEEDEEDHHQEEAANKKENNTTTVKEDHEASTYKHSSASLSSSSKSNNNNSLQLHLLPHHSNPVPLSSFSWHPPSDNCDEVGGNSGRALKVKTKAEEEESEERTVVSSSPMSGASSFPVDLCIYSSNNTNNKGSSGNNYNSRKRLQNNNESEGEAGNYNYYDQRGCSSRASDEDDNNNNVGGVSGCGTRKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLSEENRRLQKELQELRALKASNSNPFFMKLPATTLTMCRSCERVAPNNSSSNNNNNSASSSKPTISFPFAKPKFYPFPHSKPHQS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1441 389 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 75 365 - -
Lele29g1441 389 MobiDBLite consensus disorder prediction 78 103 - -
Lele29g1441 389 FunFam Homeobox-leucine zipper protein 18 216 294 - -
Lele29g1441 389 ProSiteProfiles 'Homeobox' domain profile. 229 289 IPR001356 GO:0003677
Lele29g1441 389 CDD homeodomain 233 290 IPR001356 GO:0003677
Lele29g1441 389 MobiDBLite consensus disorder prediction 41 77 - -
Lele29g1441 389 MobiDBLite consensus disorder prediction 172 228 - -
Lele29g1441 389 SUPERFAMILY Homeodomain-like 218 290 IPR009057 -
Lele29g1441 389 Coils Coil 43 63 - -
Lele29g1441 389 MobiDBLite consensus disorder prediction 349 369 - -
Lele29g1441 389 SMART halz 289 334 IPR003106 GO:0006355|GO:0043565
Lele29g1441 389 CDD bZIP 282 321 - -
Lele29g1441 389 Pfam Homeodomain 233 287 IPR001356 GO:0003677
Lele29g1441 389 MobiDBLite consensus disorder prediction 172 231 - -
Lele29g1441 389 MobiDBLite consensus disorder prediction 21 103 - -
Lele29g1441 389 Gene3D - 237 287 - -
Lele29g1441 389 ProSitePatterns 'Homeobox' domain signature. 264 287 IPR017970 GO:0000981|GO:0006355
Lele29g1441 389 MobiDBLite consensus disorder prediction 25 40 - -
Lele29g1441 389 Coils Coil 295 325 - -
Lele29g1441 389 MobiDBLite consensus disorder prediction 134 158 - -
Lele29g1441 389 MobiDBLite consensus disorder prediction 134 148 - -
Lele29g1441 389 Pfam Homeobox associated leucine zipper 289 323 IPR003106 GO:0006355|GO:0043565
Lele29g1441 389 SMART HOX_1 231 293 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1441 Lele-ChrLele29 21108479 21110222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1441 208 381 Homeobox Transcription Factor Family AT4G37790 61.143 3.76e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele29g1441 Homeodomain 1.5e-15 CL0123