Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1439 ATGGAAAAGCAGCGAAACCAAAATCACCACCACCGTAGCCCCGACAACAAGAACAACCACCGCCACCACCGTCAAACTTGGGGCACGTGGGAGGAGCTTCTCCTCGCCTCCGCCGTCAAACGCCATGGCTCCGACGACTGGGACACCGTCGCCATGGAGATCCAGAACCGCACCAACATCCCTCACCTCCTCACCACCGCACGCAACTGCGAGCAGAAATTCCTCGATCTCGAACGCCGATTCACCGCCCAATGCAACGACGCCGTTCTGGAGCCTTCGGAGAATGGCGTTCCCGCCGGCGAAGTCGTCGATCACGTTCCCTGGCTCGACGAATTGCGTAAGCTCCGGGTATCTGAGCTCCGGCGAGAGGTCCAACGTCACGACCATAAGGTGAGGAGATTGAAGGAAGAGAGAGAAAAAAGCTTGAAGGAGAATGACGCGGAACGAGATGAGAAACCAGATCTGGAAGACTCCGGGACACCGGAAATCGACGAAAAGAACGGAGGAGGAGGAGAACCTGAACCGGCGAATTCTGAACCGGGGAGGCGGGTCGAGGACGATGGAAATGACAATAGTAACGATAATAATAATAACAATAACAGCAGTACTAATAAGCTTCCAACGGGCGACGACTCCGACCGGGACAACCAATCCGTTAATGAGTCTAATTCGACCGGTTCAAGATCCGCGGGAGAGAAAACCGGGGTGGATGATGTGAAGCCTGAACCGCCTGCGGCTCAAGCCGGTCCGAAACAACCGGATCCGAGTGGGGATAAAAAAGTGGAGGACTCGTCCGAGTTGAGAGACTCGGTGGCCCACTCGGAAGGGGGAGGGACGAGGGAAAGCGGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAGAGGAAGACGCGAAAGAGGAAGAAGGTCTCCGGCGGCGGAGGTAACGGGGAGGAGGAGGCGCCGGAGAACGATACGGTGGCGGCAAAATCACAACCGTTGGTTGGCCTCTTGGAGCTGATCAAAGGACATGAAAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAAGCATGGTACGTGAGCACGTGGACTTAGAAATCATACAAACGCGGCTTCGAAACGGCTACTACTCCTCGGGCACTACCGCCTTCTTCCGTGACCTCTTCCTCCTCTTCACCAACTCCATCGTCTTCTTCCCCTCCTACTCCCTCCACTCACGCGCCGCCACCCACCTCTGCAACCTCCTTTCCGATGAGATGAAGAACTTCTCCCAACCCCACAATAACAACACCCCTCCTTCACTCCCACCTCCGCCGCCCCCATCGTCGTCAGCCTCGGTCAAGCCTGATTCTTCTAATAATAATTTGCTTTCCAAGGACAAAGCTGCTGCTTCCATACTGGTTTGCCGGAAACGCAGTTCCATGTCCAGTAAACCTTCATCTGCCTCTACCTTTAGTAAGGGTAGTGACCGGTTAAGCAGTGAGAAGAAACCACCACCTCCCCAGAAGAGGCCACCGTCGTCGGTTTCTGATGATTCAGATGAAGAACCACTTTCTCCTCCTCCTGCTCCTCCTTCTCTGCCGCTTAAGTCGAAGGAAAAACCGGTGACCGGAGTAAGAAGCATGAGAAGAGGCAACAAAAACCTCGGTGGCAGCAGCGGGGCCGGAGCCACCCAGAACAAGAAGCTTCAGTCCAGTAGTAAAGCAAGCCCTCCCAAACCAGATCACAAAAGCAAAGCAGCGGCGGCGGCGGCGGCAGCAGAAGCAGAAGAACAAGCAGCCTCAGCGTCGGACAAAAAGAGGAGCGCGGCGGCAGATTTCTTGAAAAGGATAAAGAAAAACAGCCCGGGTGAGGCAATGAAGAGCGCCGGGGGCGGCCGAGGAGGCGGTGGCGGAAGAGATCAGAAGAAGTTGGTGGGAAGTGGTGGGAAGGGTGAACAGAAAGGTGGGAGGGAGAGAACATTGAGGAATGGTGGTAGAACAGGGGAGAGGAATACAACAACAGAGAATAATAGCAATCAGAAGTCAAAGAGAAGCGTAGGAAGGCCACCAAAGAAAGTAGCAGAAAGTAATATCAATAACAATAATGCTTCTGGTTCTACTAAACGTGGAAGGGAAAGTGGTGGTGGTGGTGGTGGTGGAGGGAAGGATAAAAGGCCCAAGAAACGAAGCAGGAAGTAA 2184 0.5435 MEKQRNQNHHHRSPDNKNNHRHHRQTWGTWEELLLASAVKRHGSDDWDTVAMEIQNRTNIPHLLTTARNCEQKFLDLERRFTAQCNDAVLEPSENGVPAGEVVDHVPWLDELRKLRVSELRREVQRHDHKVRRLKEEREKSLKENDAERDEKPDLEDSGTPEIDEKNGGGGEPEPANSEPGRRVEDDGNDNSNDNNNNNNSSTNKLPTGDDSDRDNQSVNESNSTGSRSAGEKTGVDDVKPEPPAAQAGPKQPDPSGDKKVEDSSELRDSVAHSEGGGTRESGEVQSSASLTRKRKTRKRKKVSGGGGNGEEEAPENDTVAAKSQPLVGLLELIKGHENSSLFERRLESQEEWEKYKSMVREHVDLEIIQTRLRNGYYSSGTTAFFRDLFLLFTNSIVFFPSYSLHSRAATHLCNLLSDEMKNFSQPHNNNTPPSLPPPPPPSSSASVKPDSSNNNLLSKDKAAASILVCRKRSSMSSKPSSASTFSKGSDRLSSEKKPPPPQKRPPSSVSDDSDEEPLSPPPAPPSLPLKSKEKPVTGVRSMRRGNKNLGGSSGAGATQNKKLQSSSKASPPKPDHKSKAAAAAAAAEAEEQAASASDKKRSAAADFLKRIKKNSPGEAMKSAGGGRGGGGGRDQKKLVGSGGKGEQKGGRERTLRNGGRTGERNTTTENNSNQKSKRSVGRPPKKVAESNINNNNASGSTKRGRESGGGGGGGGKDKRPKKRSRK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1439 727 CDD SANT 26 58 IPR001005 -
Lele29g1439 727 Gene3D - 17 76 - -
Lele29g1439 727 SUPERFAMILY Bromodomain 323 428 IPR036427 GO:0005515
Lele29g1439 727 MobiDBLite consensus disorder prediction 122 321 - -
Lele29g1439 727 SMART bromo_6 117 426 IPR001487 GO:0005515
Lele29g1439 727 MobiDBLite consensus disorder prediction 122 169 - -
Lele29g1439 727 Coils Coil 117 151 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 547 572 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 1 24 - -
Lele29g1439 727 Pfam Myb-like DNA-binding domain 24 58 IPR001005 -
Lele29g1439 727 MobiDBLite consensus disorder prediction 661 679 - -
Lele29g1439 727 CDD Bromodomain 330 413 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 689 704 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 471 490 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 424 727 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 594 617 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 255 275 - -
Lele29g1439 727 Coils Coil 580 607 - -
Lele29g1439 727 ProSiteProfiles Bromodomain profile. 335 407 IPR001487 GO:0005515
Lele29g1439 727 MobiDBLite consensus disorder prediction 191 207 - -
Lele29g1439 727 MobiDBLite consensus disorder prediction 447 461 - -
Lele29g1439 727 ProSiteProfiles Myb-like domain profile. 19 58 IPR001005 -
Lele29g1439 727 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 15 727 - -
Lele29g1439 727 SMART sant 23 80 IPR001005 -
Lele29g1439 727 SUPERFAMILY Homeodomain-like 19 59 IPR009057 -
Lele29g1439 727 Pfam Bromodomain 330 410 IPR001487 GO:0005515
Lele29g1439 727 Gene3D - 313 426 IPR036427 GO:0005515
Lele29g1439 727 MobiDBLite consensus disorder prediction 431 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1439 Lele-ChrLele29 21077251 21082578 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele29g1439 Bromodomain 1.1e-09 No_clan