Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1429 ATGGCGCCGAAACATGCTAGGATCACCAGAAATCCTGAATTGATAAGGGGGGTCGGAAAGTTTTCGAGGTCGAAAATGTACCACAAGAGAGGTTTGTGGGCCATCAAGGCTAAGAACGGCGGCGTTTTCCCTCATCACGATCCCAAACCTAACCCTGAAGCTCCTGCCGAGAAGCCTCCGAAGTTCTACCCTGCTGATGACGTTAAGAAGCCCCTTGTCAATAAGCACAATCCAAAACCTACCAAGCTCAGGGCCAGCATTACTCCTGGAACAGTATTGATACTTCTTGCTGGGAGATTCATGGGAAAGAGAGTAGTGTTCCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACCGGTCCATTTAAGGTAAATGGAGTTCCTTTGAGGCGTGTTAGTCAATCTTATGTCATCGGAACATCCACCAAGGTAGATATCTCCGGAGTTAATCTGGGGAAGTTCGACGACAAATACTTCGCCAAGAAAGCTGAGAAGAAGAAGCAAAAGGTAGAGGAAGAGTTCTTTGAGGCGGAGAAGGAGGAGAAAAATGTGATCCCACAAGAGAAAAAAGATGATCAGAAAGTAGTGGACGCAGCATTGATAAAAGCCATTGAGATCATTCCTGATTTGAAGGCTTATTTGGCTGCAAGGTTTTCTCTCAAGGCAGGCATGAAACCTCATGAGCTTATCTTCTAA 696 0.4583 MAPKHARITRNPELIRGVGKFSRSKMYHKRGLWAIKAKNGGVFPHHDPKPNPEAPAEKPPKFYPADDVKKPLVNKHNPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVSQSYVIGTSTKVDISGVNLGKFDDKYFAKKAEKKKQKVEEEFFEAEKEEKNVIPQEKKDDQKVVDAALIKAIEIIPDLKAYLAARFSLKAGMKPHELIF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1429 231 Pfam Ribosomal protein L6e 124 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele29g1429 231 MobiDBLite consensus disorder prediction 50 74 - -
Lele29g1429 231 CDD KOW_RPL6 79 231 IPR041997 -
Lele29g1429 231 SUPERFAMILY Translation proteins SH3-like domain 85 175 IPR008991 -
Lele29g1429 231 Coils Coil 160 180 - -
Lele29g1429 231 Gene3D - 85 174 IPR014722 -
Lele29g1429 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele29g1429 231 Pfam Ribosomal protein L6, N-terminal domain 5 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Lele29g1429 231 FunFam 60S ribosomal protein L6 85 170 - -
Lele29g1429 231 MobiDBLite consensus disorder prediction 41 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1429 Lele-ChrLele29 20969154 20970567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1429 4 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.825 2.81e-119 337