Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1418 ATGCACAGTTACACTAACCGAAGCTACCACCTGCAAAGGGAGATCGAATGTGAAGCGCGCGAGGGGGTAGAGCTTGCTAAAGGCTTAATAGAAACCCTATATATTGTTCTGTCTGCTACAACTAGGGTTCTGTGTTGGCGGTGGAATCTGCGCAGTTGGTCTTACACTCGTGAAGCTGCAACAATGGTGGAAAAGACCGCAAAGGGGAGAAAGGAGGAGGTCGTCACCAGAGAGTACACCATTAACCTCCACAAGCGCTTGCATGGATGCACATTCAAAAAGAAGGCTCCCAAGGCAATAAAGGAAATTAGGAAGTTTGCCCAGAAGGCTATGGGAACAACCGATGTGAGAGTGGATGTCAAGCTTAACAAGCACGTCTGGAGCGGTGGAATCCGCAGTGTCCCAAGGAGAATTCGTGTTCGCATAGCCCGAAAGAGAAATGATGAAGAAGACGCCAAGGAAGAGTTTTTCTCATTAGTCACTGTTGTAGACATCCCGAGAGAAGAATTGAAAGGTTTGGGTACCAAGTTGATTGACGAAGAGGATTAA 549 0.4736 MHSYTNRSYHLQREIECEAREGVELAKGLIETLYIVLSATTRVLCWRWNLRSWSYTREAATMVEKTAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHVWSGGIRSVPRRIRVRIARKRNDEEDAKEEFFSLVTVVDIPREELKGLGTKLIDEED 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1418 182 Pfam Ribosomal protein L31e 73 154 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lele29g1418 182 PANTHER 60S RIBOSOMAL PROTEIN L31 63 180 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lele29g1418 182 SUPERFAMILY Ribosomal protein L31e 73 154 IPR023621 -
Lele29g1418 182 FunFam 60S ribosomal protein L31 68 181 - -
Lele29g1418 182 Gene3D - 71 182 IPR023621 -
Lele29g1418 182 CDD Ribosomal_L31e 71 154 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lele29g1418 182 SMART Ribosomal_L31e_2 72 155 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1418 Lele-ChrLele29 20907325 20910220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1418 68 182 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 83.478 7.60e-67 198