Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1411 ATGGCTCACAAAGGAATTGAACCATGGACATTTGTTCAGAAACTGGGAGATGCAGTTTTGATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTCAAGTCATGTATTAAGGTTGCTCTCGATTTCGTGTCACCTGAAAGTGTAGATGAGTGTCTTCGTTTGACAGAGGAATTTCGCACCCTTCCCATAAATCACAGGGCTATTGAAGACAAATTGGAGATCAAAAAGATGCTCATTCATGCCATGAGAACGGTAGTGAAGGAAGTTGGAGAAAGCAAGGAAGAAAGCGCTAAGGCTGAATTGTAG 306 0.4281 MAHKGIEPWTFVQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESVDECLRLTEEFRTLPINHRAIEDKLEIKKMLIHAMRTVVKEVGESKEESAKAEL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1411 101 Pfam JmjC domain, hydroxylase 4 42 IPR003347 -
Lele29g1411 101 SUPERFAMILY Clavaminate synthase-like 4 82 - -
Lele29g1411 101 Gene3D Cupin 1 68 - -
Lele29g1411 101 ProSiteProfiles JmjC domain profile. 1 59 IPR003347 -
Lele29g1411 101 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 4 95 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1411 Lele-ChrLele29 20853697 20860961 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele29g1411 JmjC 1.5e-11 CL0029