Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1397 ATGTTTTTACACATTGTTCTAAGGTCATCTCTTTTGGTTCCTAGAATAAAATGGGAAGTCAGAAAATGGCCTTTATTGGTTCTAACAAGTCGAACCTTTCTTTTCAGGCTTGTTGAATCTACCTCGCACTGCATTCTGTTGAATTCGAAAGAGCTTGGCCGTGTGCATTACATAGATGCGGGGTTTCCTTATACTGTCACTGAAAGCTTCATGGACTTCTTTGAAGGCGTCACGTATGTTCCAGCGAATTGTCTTCACAACGGATCCGTGCCTGATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATACAAATACGACATGTCTGGCCCTTTGTGTCCATCTTATTTTGGTTATCCTGAATATATCCTTCCCTTACCAAGGATGGACGTCAACAGAGGACAGTGGGAAAGCCCTTCAACAATGACGGTTGAGGAGCCTGCCACAACAGACTCTTTGTCCAGAAGGGATGGAGTCGCTAGCATGCAGACTATTCCTGAAGAATGCAGCCCTAATCATCAAGATTCCCCTGGTACTCAGGTTGTATGGCAGCAAGACAGCATAGATCCCGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGCAGAGGCCTTTCCAAAGAACTTATTGATTTGCTTCCAGTCTCAAAGTACAATCTTAAAAGCATGTTTAAAAGAAAAAACTATGGGAAAAGGTGTGTGATTTGTCAGATGACATACAAAAGAGGGGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 879 0.43 MFLHIVLRSSLLVPRIKWEVRKWPLLVLTSRTFLFRLVESTSHCILLNSKELGRVHYIDAGFPYTVTESFMDFFEGVTYVPANCLHNGSVPDQESANWMMNMSPYKYDMSGPLCPSYFGYPEYILPLPRMDVNRGQWESPSTMTVEEPATTDSLSRRDGVASMQTIPEECSPNHQDSPGTQVVWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKELIDLLPVSKYNLKSMFKRKNYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1397 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 286 IPR013083 -
Lele29g1397 292 ProSiteProfiles Zinc finger RING-type profile. 241 282 IPR001841 -
Lele29g1397 292 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 54 288 IPR033276 GO:0004842|GO:0016567|GO:0046621
Lele29g1397 292 Pfam Ring finger domain 240 282 IPR001841 -
Lele29g1397 292 FunFam E3 ubiquitin ligase BIG BROTHER 203 286 - -
Lele29g1397 292 SMART ring_2 241 281 IPR001841 -
Lele29g1397 292 MobiDBLite consensus disorder prediction 138 157 - -
Lele29g1397 292 SUPERFAMILY RING/U-box 240 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1397 Lele-ChrLele29 20741406 20752429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1397 55 290 C3H Transcription Factor Family AT3G63530 50.633 3.71e-80 241