Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1391 ATGGCATTGTGTGGCCGAATCAGATCAGGCATCTCTCTCGTCAACAAATTGGCGTATCTTAGTTCCGATCCTGTCTCTGCTCAGAGATCCACAATTCACCGATCCCTGATTGCCCCCTTCACTTGCCTGGACTCAAGGAACTATGCCACTGCAGCAGGGAAAAAGGAGGAAAAAGTAAAGGTGCCACTGGCCTTGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTACACGGCAGCAGTAAAAGCTAATGCATTGGAAAAGGTTGAGTCTGAGGTTCTTGACCTTGTTGAGGCAATGAAGAATAGTCCTAAATTTGCACAGTTCACAAAGGACTTGTCTGTGCCTAAAGATACCAGAATTAAGGCCATCCAGGAAATTTCTAAGGAAGCTAAATTTTCAGATATTACGAAGAACTTCCTTGTTATCCTGGCTGAGAATGGAAGGCTAAGAAACGTAGATACCATAGCAAAGAAGTTTGCACAGTTGACAATGGCCCATAAGGGAGAAGTGAAAGCTATTGTGACCACTGTTATTCCTCTTCCCCCTCAAGAAGAGAAGCAACTGAAAGAGACCCTTCAAGAGATCATAGGCGCAGGGAAAAAGGTTCATATTGAACAGAAGATTGATCCTAGCATCCTTGGTGGTCTAGTGGTAGAATTTAACCAGAAGGTCCTAGATGTTTCGATTAAGACTAGGGCTAGCCAGATGGAGCGGTTCCTCCGAGAGCCCATAAACTTGGGCGAAATCTAG 753 0.4489 MALCGRIRSGISLVNKLAYLSSDPVSAQRSTIHRSLIAPFTCLDSRNYATAAGKKEEKVKVPLALFGGSGNYASALYTAAVKANALEKVESEVLDLVEAMKNSPKFAQFTKDLSVPKDTRIKAIQEISKEAKFSDITKNFLVILAENGRLRNVDTIAKKFAQLTMAHKGEVKAIVTTVIPLPPQEEKQLKETLQEIIGAGKKVHIEQKIDPSILGGLVVEFNQKVLDVSIKTRASQMERFLREPINLGEI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1391 250 Pfam ATP synthase delta (OSCP) subunit 70 239 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 Hamap ATP synthase subunit delta [atpD]. 64 243 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 Gene3D - 68 161 IPR026015 -
Lele29g1391 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 203 222 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lele29g1391 250 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 71 240 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 69 170 IPR026015 -
Lele29g1391 250 PANTHER ATP SYNTHASE DELTA CHAIN 44 243 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 PRINTS ATP synthase delta subunit signature 201 216 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 PRINTS ATP synthase delta subunit signature 68 87 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 PRINTS ATP synthase delta subunit signature 138 149 IPR000711 GO:0015986|GO:0046933
Lele29g1391 250 PRINTS ATP synthase delta subunit signature 149 163 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1391 Lele-ChrLele29 20678900 20685152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1391 3 250 Primary Pumps ATPases AT5G13450 49.597 1.13e-68 208