Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1387 ATGAATCTCATGGCAGACAATAATCACGGAGGTTCTGTGCATGAACCGGCACATGATAATAATAATAAAAAGAACAAATGGAAGTTGCCTCTCCTTGTTTTCTTCAACGATGTAAGAAATGTGCTCAAGATGGATTCAATTGGTCGGGAATTACTGGGAATTGCATTCCCAGCTGCTTTGGCTGTGGCTGCTGATCCCATTGCTTCTCTCATTGACACTGCTTTCATTGGTCACTTGGGTCCTGTGGAACTTGCTGCTGCTGGAGTATCCATAACATTGTTCAACCAAGCTTCAAGGATCACTATCTTCCCTCTCGTCAGCATCACAACTTCATTTGTAGCAGAGGAAGATACTCTCAAGAAAATCTCAGAAACTAAACTATTAGAAGATCATCAATCCAACAACGACAACAATCTTAGTAATAAGAAGCCAACAAAAGAAAGTGTCGCAGATGAAGAGGCCGACGACGACGACAATGAAAAAGGTTGTACCAAACAGAAGAATCATCATGATGCTTCTGTTGTGGCAAACTCTTCTTCATCTGCAAATAATAATGTTGAGTTTGAGAATTCTAATACTTATGATGCTTCTATCAAATACGACAAGAATAGTAATAAGAGCAAGAGTTGTAAGAATAATCAGAGCAAGAAGACGAAGAGGAAACAAATAGCTTCAGCATCAACAGCATTAATATTTGGGACAATTCTTGGTCTCATTCAAGCATCATTGCTCATATTTGCTGCAAAACCTCTCTTACTTCTTATGGGTGCCAAACCAGGTTCTCCTATGCTGATTCTGGCTCAAAAATATTTGAAACTGAGAGCAGTGGGTTCTCCTGCTGTCCTTCTAGCTTTGTCTATGCAAGGAATATTCCGAGGCTTCAAGGACACCACAACTCCCTTATATGTTATTGTGTTCGGATATTCCATAAATGTGTCATTGGATCCAATACTTATATTTCACTTGAAGTTAGGCCTCAAAGGGGCAGCCATTGCACATGTCATCTCACAGTACTTGATGGCACTGGTTCTGTTGTTGATATTACTGAGAAGAGTCGATCTGTTACCTCCTAGTCTTAAGGATTTGCAGATTTTCCGGTTCCTTAAAAACGGAGGGTTGTTGATGTTAAAAGTAATAGCAGTAACATTCTGTGTGACATTTGCGGCTTCATTAGCAACAAGGTTGGGTCCCATTTCCATGGCTGCTTTCCAAACCTGTCAACAAGTTTGGATCACTACTTCCCTTCTTGCTGATGGTTTAGCTGTTGCTATTCAGGCCGTTCTAGCATGTTCGTTTGCTGAGAAAGACTATGTGAAGACCAAAGCAGCAGCAGCAAGAGTACTTCAAATGACATTTGTAATGGGAGTTGGGCTGTCTCTGGTAGTAGGCATTGGTTTGTACTTTGGAGCTGGCGTCTTCTCCAAAACCCCCACTGTTCTCCAACTCATCAGAATAGGCCTCCCTTTTGTAGCAGCAACACAACCAATCAATGCACTAGCGTTTGTGTTTGATGGTGTCAACTACGGAGCTTCTGATTTTACATATGCAGCCACTTCTTTGGTAATAGCTTCAATTGTGAGCGTCGGAATAGAATATGCCATGTATAAGATGAAAGGATTCGTTGGCGTCTGGATTGGTCTGAGTATTTATATGGCTCTTCGCATGCTTACTGGTGTTTGGAGGATGGGAACAGGAACAGGACCTTGGCGTTTCCTTAGACAATGA 1725 0.4157 MNLMADNNHGGSVHEPAHDNNNKKNKWKLPLLVFFNDVRNVLKMDSIGRELLGIAFPAALAVAADPIASLIDTAFIGHLGPVELAAAGVSITLFNQASRITIFPLVSITTSFVAEEDTLKKISETKLLEDHQSNNDNNLSNKKPTKESVADEEADDDDNEKGCTKQKNHHDASVVANSSSSANNNVEFENSNTYDASIKYDKNSNKSKSCKNNQSKKTKRKQIASASTALIFGTILGLIQASLLIFAAKPLLLLMGAKPGSPMLILAQKYLKLRAVGSPAVLLALSMQGIFRGFKDTTTPLYVIVFGYSINVSLDPILIFHLKLGLKGAAIAHVISQYLMALVLLLILLRRVDLLPPSLKDLQIFRFLKNGGLLMLKVIAVTFCVTFAASLATRLGPISMAAFQTCQQVWITTSLLADGLAVAIQAVLACSFAEKDYVKTKAAAARVLQMTFVMGVGLSLVVGIGLYFGAGVFSKTPTVLQLIRIGLPFVAATQPINALAFVFDGVNYGASDFTYAATSLVIASIVSVGIEYAMYKMKGFVGVWIGLSIYMALRMLTGVWRMGTGTGPWRFLRQ 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1387 574 MobiDBLite consensus disorder prediction 170 187 - -
Lele29g1387 574 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 17 573 IPR044644 -
Lele29g1387 574 MobiDBLite consensus disorder prediction 125 187 - -
Lele29g1387 574 MobiDBLite consensus disorder prediction 199 218 - -
Lele29g1387 574 MobiDBLite consensus disorder prediction 1 21 - -
Lele29g1387 574 Pfam MatE 225 317 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele29g1387 574 Pfam MatE 375 532 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele29g1387 574 TIGRFAM matE: MATE efflux family protein 57 544 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele29g1387 574 CDD MATE_DinF_like 65 564 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1387 Lele-ChrLele29 20624095 20631240 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1387 29 20624095 20631240 Lele31g0187 31 1844192 1849026 hybridization
Lele29g1387 29 20624095 20631240 Lele32g1222 32 13185179 13190605 hybridization