Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1378 ATGCCTCAAGCACTTCCTTTTTCGAAGCGGGAAAAACCATGTTTGTGGTTTATGAGTGGTTCTGTTCATTTGAAAACTTGTGTGCCTGAAGGATCAGCCTATGGTTTGCTAAAAGGAATGATGAAGTTTGCAGGATATTCCCTGGCAGTTTCATCTACTCCTATAAGTTCTAATATCATTAAAAACCGTTGCAGATTGTCAGTAGGTACATCTCGTCGGAAATTCCACAGGTCAAGATTATTTTCTGCTCATACACAGAGTGAACAGTCGCACGGTAAATCCGTGATGGTTGCCAAATACTACCTTCCTCCTTGGTTTAGTGTTGCCCCAATGATGGACTGGACAGACCATCACTATAGGACTCTTGCACGCCTCATATCAAAACGTGCTTGGCTGTACACCGAAATGCTTGCAGCTGAAACAATTGTTTATCAGAACGGCAACCTGGACAGATTCTTGGCATATTCTCCAGATCAACATCCTATTGTGCTTCAGATTGGAGGGAGTAATTTGGAAAATTTGGCAAGGGCAACTGAACTTGCAAATGCTTACAACTATGATGAGATCAATTTTAATTGTGGATGCCCTAGTCCTAGAGTAGCTGGGCATGGGTGCTTTGGTGTGCGTCTTATGCTTGATCCAAAGTTTGTTGCTGAGGCCATGTCAGTCATTGCTGCCAACACAAATGTGCCTGTCAGCGTCAAATGTCGAATAGGTGTTGATGATCATGATTCTTACAATGAGCTGTGTGATTTCATATACAAGGTTTCTTCCATGTCACCCACTAAGCATTTCATAATACACTCAAGGAAGGCACTACTTAATGGCATTAGCCCTGCTGAAAATCGGAGTATTCCCCCTTTGAAATATGAATATTTTTATGGTCTATTACGTGACTTTCCTGACTTAACATTTACCATAAATGGTGGCATTACTAGTGTTGATGAGGTCAATGAAGCTCGAAGGGTTGGAGCTCATGGTGTTATGGTTGGACGTGCAGCATACCATAACCCTTGGCAAATTTTGGGACATGTTGATACTGCAATTTATGGTGAACCTAGCAGTGGTCTCACACGTCGTCAGGTCCTTGAGAAATATCAAGTGTATGGGGACTCAGTGTTGGGAATGTATGGACGTAAGCCAAATGTGCGAGATATAATGAAGCCCTTGCTTAATTTTTTCCACTCAGAGGCTGGGAATGGACTTTGGAAGCGCAAAGCAGATGCTGCATTCCAAAGTTGCACAACAATCAAATCATTTTTAGACGAAACCCTTGTAGCAATTCCTGACTCAGTCTTGGATTCACCTATTGGAGAGCTTCAACCTGGTCGCACAGATCTTTTTGCCAACATAGAAAGTATATTGCCTACTCCATACACAAGAACAAGAGAAGAAGATGCTATATATGCTTGA 1413 0.4218 MPQALPFSKREKPCLWFMSGSVHLKTCVPEGSAYGLLKGMMKFAGYSLAVSSTPISSNIIKNRCRLSVGTSRRKFHRSRLFSAHTQSEQSHGKSVMVAKYYLPPWFSVAPMMDWTDHHYRTLARLISKRAWLYTEMLAAETIVYQNGNLDRFLAYSPDQHPIVLQIGGSNLENLARATELANAYNYDEINFNCGCPSPRVAGHGCFGVRLMLDPKFVAEAMSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSMSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVNEARRVGAHGVMVGRAAYHNPWQILGHVDTAIYGEPSSGLTRRQVLEKYQVYGDSVLGMYGRKPNVRDIMKPLLNFFHSEAGNGLWKRKADAAFQSCTTIKSFLDETLVAIPDSVLDSPIGELQPGRTDLFANIESILPTPYTRTREEDAIYA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1378 470 CDD DUS_like_FMN 106 339 IPR035587 -
Lele29g1378 470 SUPERFAMILY FMN-linked oxidoreductases 105 405 - -
Lele29g1378 470 FunFam tRNA-dihydrouridine(20/20a) synthase 103 350 - -
Lele29g1378 470 Gene3D Aldolase class I 102 345 IPR013785 -
Lele29g1378 470 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 99 465 IPR004653 GO:0002943|GO:0017150
Lele29g1378 470 Pfam Dihydrouridine synthase (Dus) 108 422 IPR035587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1378 Lele-ChrLele29 20507917 20513309 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1378 29 20507917 20513309 Lele31g0199 31 1973837 1977950 hybridization
Lele29g1378 29 20507917 20513309 Lele32g1211 32 13076964 13082522 hybridization