Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele29g1372 | ATGGAGGAAGTTCAGGCGACTCAAACTCAACCGCTGGGTGAAGAAGATCAAAATGAAATAATTACCGAAAGTTCTGCATTTGTTAAAGGGGAACCTCCACAGGAAGTGAGTAATCCTCCTAAAGTGGATTCAGAGGTTGAAATCCTCCATGAGAATGTTACAAAACAAATAATTAAGGAAGGTCATGGTCAGAAGCCTACCAAATATTCAACATGCTTTTTTCACTACAGGGCATGGACAGAAAGCTCACAGCACAAGTTTGAAGATACATGGGATGAGCAACGACCCATTGAAATGATATTGGGAAAAGAAAAGAAAGAAATGGCTGGCTTGGCTATTGGTGTGGCTAGCATGAAAGCTGGAGAACGTGCCTTACTACGTGTGGGCTGTGAACTAGGATATGGAAAGGAAGGCAGCTTCTCTTTTCCAAATGTTCCACCTATGGCAGATTTAGTTTATGAAGTTGAGCTCATAGGCTTTGATGAAACAAAAGAAGGGAAACCTCGCAGTGATATGACTGTTGAGGAAAGGATTGGTGCAGCAGATCGTAGAAAGATGGATGGAAATGCTTTGTTTAAAGAGGAGAAATTGGATGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTTTGGCTGTAAAGAATCCTTGCCACCTTAACATGGCTGCATGTCTGATTAAGCTGAACCGTTATGACGAAGCCATAGGACAATGTAGCCTTGTGTTGAGTGAGGATGAAAACAATGTGAAGGCATTATTTAGACGAGGTAAGGCTAGGGCAGCACTAGGCCAAACAGATGCTGCCAGGGAGGATTTTCTGAAAGCAAAGAAGCATGCCCCAGAAGATAAAGCAATAGCAAAAGAATTGCGATTGCTTGCTGAACACGACAAGGCTATTTATCAAAAGCAAAAAGAGATATATAAAGGAATGTTTGGACCAAGGCCTGAACCAAAACCCAAGCAAACGAATTTTCTGATTCTCATTTGGCAGTGGTTGCTGGCAGTTTTTCATCACCTCATCATGTTATTCAAGTGTGAAAGGCGAAAATCTGACTAA | 1107 | 0.4182 | MEEVQATQTQPLGEEDQNEIITESSAFVKGEPPQEVSNPPKVDSEVEILHENVTKQIIKEGHGQKPTKYSTCFFHYRAWTESSQHKFEDTWDEQRPIEMILGKEKKEMAGLAIGVASMKAGERALLRVGCELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKEGKPRSDMTVEERIGAADRRKMDGNALFKEEKLDEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYDEAIGQCSLVLSEDENNVKALFRRGKARAALGQTDAAREDFLKAKKHAPEDKAIAKELRLLAEHDKAIYQKQKEIYKGMFGPRPEPKPKQTNFLILIWQWLLAVFHHLIMLFKCERRKSD | 368 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele29g1372 | 368 | Gene3D | Tetratricopeptide repeat domain | 163 | 294 | IPR011990 | GO:0005515 | |
Lele29g1372 | 368 | FunFam | Peptidylprolyl isomerase | 166 | 294 | - | - | |
Lele29g1372 | 368 | Pfam | Tetratricopeptide repeat | 267 | 297 | IPR019734 | GO:0005515 | |
Lele29g1372 | 368 | Gene3D | - | 37 | 162 | IPR046357 | GO:0003755 | |
Lele29g1372 | 368 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Lele29g1372 | 368 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lele29g1372 | 368 | ProSiteProfiles | TPR repeat profile. | 266 | 299 | IPR019734 | GO:0005515 | |
Lele29g1372 | 368 | SUPERFAMILY | FKBP-like | 31 | 160 | - | - | |
Lele29g1372 | 368 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 69 | 161 | IPR001179 | GO:0003755 | |
Lele29g1372 | 368 | SMART | tpr_5 | 181 | 214 | IPR019734 | GO:0005515 | |
Lele29g1372 | 368 | SMART | tpr_5 | 266 | 299 | IPR019734 | GO:0005515 | |
Lele29g1372 | 368 | SMART | tpr_5 | 232 | 265 | IPR019734 | GO:0005515 | |
Lele29g1372 | 368 | PANTHER | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED | 96 | 340 | IPR039663 | - | |
Lele29g1372 | 368 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 65 | 158 | IPR001179 | GO:0003755 | |
Lele29g1372 | 368 | SUPERFAMILY | TPR-like | 173 | 327 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele29g1372 | Lele-ChrLele29 | 20468159 | 20471976 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele29g1372 | 53 | 334 | Calmodulin-binding Proteins | AT5G48570 | 33.110 | 1.20e-30 | 120 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele29g1372 | 29 | 20468159 | 20471976 | Lele31g0205 | 31 | 2014160 | 2018024 | hybridization | |
Lele29g1372 | 29 | 20468159 | 20471976 | Lele32g1206 | 32 | 13039425 | 13043305 | hybridization |