Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1370 ATGAAGAGGTTGAGGTCTAGCGAGGACCTCCATTCGTACGGAGACAAAAATGGCTGCAAGGATTCGAATCTGAATCGATCCTCGTCTTCTTCCCACCGAACCTTTTACTACAAACCTGATAATGTGCGGAAGGGATTGCTTTCCTCATCGTCTTCGGCGTCTCGTTATGACAGGGATCGCACGATGGATGAGGATCGGGATGGCTCCCGCTTGGTTCGGAAGCGATCAGACCATGATTTTGATAGTTTTGATCGCAGAAAGGGGTTTGATCGTTACAGGGACACTGGAGATAGTCGAGGATACGGAGCTGGAGGGGATAGGGGTTTGATTCAGAGGTCGGAGAGTTTTTGCGGGTCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCTGAGAGGGACCGGTCTCGGCGAGAAGGCAGTGTGTCCTCTTGGCGGAGATTTGGTGGTGGGTTAAAGGATTTTGATGATAGTGGCAGGGGTAGCAGGGTTGGACTGGAAGATAGAGTAGTGCGGTCTCCAAAGAATTTGAGGGATGTAAAATCCCCGACACGGTCAAAAGATTCAGAGAGCGAGCATTCTAAGATGAGGTCTTCTTCAAGAGGGTCCAGAGATGCAAAGTCGAAGTCCAAGTCTCCATCTTGGTCCAAGGATTCAGAGAGTGAACAATCAAGAAGTGAGCAATCGAAGAGTGCGGAGGTGAAGAAAACTGAGGAAGTGCAGGTTGAGAGCCGTAGTAGTAGTGAAATGGAAGAAGGAGAATTGGAGCCAGAACCCATGACTGAAACAGAACAAGAAAAGGCTTCTAATGCTGCACCTAAGAATGAAGACCAGACCTCTATTCCTTTGGACGCCGATGAGAAGGAAATCCAGACTGAAAGCCAGCTCAATGATACAGATGCTATTATACATGAAATACCCGACTCGTTAAATAAAGAAGAGTCAAAACCAGAAGAAGGTACCGAGTCAGCAGAACAGAATGTGGTGAAAGATGATAAGATGCCAGATGTTCAGAATGATCCAACTGATAAAGTGCGTGATACAGAAAATGGAATTGAAACTTCTGTTCATAATGGTAACAAGGCAGAAGGGAGTCGGAAAGTCGAAATCGCATGTAAGGGAGAAACAAAAGAAGGTGCGGAGCAAGAGAAACCATTGCTTCATGAAGAGGAACATAAGCAGGAAAAGGGTGTAGATCTTGAAACCAGGGCAGACTCTGACCAACCAGAGCCACACAAGGAAGTTTCAACAGACAATGAAGTGCTTAAAACTGATGGGGAAATAACGATGGAGACTGTGACCAACAACGTGAGGGATAGAGGCAAAAGTGTCTCTGTGACTCCTACTAATGTTGTTCATCCTTCTGAAGATGTTTTGTGGAATGACAGAGGACCCAGAGATCTCACAACATGCTATGGCGATGCCATGGAAGGTCCAAAAACAAGGGGCTTTGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGCAAAGAAAACTGACCAATCAAGTCTCAGCAAACATAAAGATGAAAGTCTTTCAATGGAGGATCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCTAATGAGAATACACCAGCACCTGGATCCCCCAGTGAAGCTCGAAGTGTACAGTCTTTAAGTACATTTCGTACCAACTCAGAAGGATTTACTGCGTCAATGACTTTCTCAGGTTCTCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCAATCGACTTTGAACAATCTGTTCATAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGCTGGCAAGGTCAGTATCAGACTAATCCCAAACAGAAAGAAATTCCTTGCTGTCAAGGAACTTTGGTTAATGGCAGTGGCACTTTTTGTCAGTCTCAAGCAGCATGGGGCGTTTTGGAGGGTCAAGCTGTGAAAGGTCAGCCTTCTAGGGTTCTCGAAGGTAGCTCAAAAATGGCCAGTGGACTTGACAGGCAGTTGAGTTTTCATAAGCAGCTGTCAGGACAGTCAAGGCGTCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGTTCTCATGACATTGGGTCAAGTTATAGTTTTGACAAGAAGAGAGAAATGAGAGACAGGAGTAATGGTAGTTTATATAGAACTGCAAGCCACAAGGAACATGAGCAATTTCAGATGGTTGGACTTGAGTTTGTTGAGACTATCATTGCAAAAATAGTTTCTGAACCAGTGCCTGCAATGGCTAAGAAGTTTCATGAAATGGCTGGACAGACTTTGTCATGCTTGAAAGAGAGCATTCGTGAGATCATGCTTAATGCAGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTCTGCAGAACAGGTCTGATATAACCTTGGAGGTTTTACTAAAGGCCCACAGAGTTCAGTTGGAAATTTTGGTTGCTTTGAAAACAGGTTTAACTAATTTTATTCAGTTAGACAACGGCATTTCGTCTACTGATTTAGGTGAGATTTTTCTGAACTTAAGATGTAGGAATCTTTTATGCCGGAGTCAGTTGCCTGTGGATGAATGTGATTGCAAAGTTTGTGCGCAGAAAAGTGGCTTTTGCAGGGAATGCATGTGCCTTGTGTGCTCTAAGTTTGACAATGCATCAAATACATGTAGTTGGGTCGGGTGCGATGTTTGCCTTCATTGGTGCCATACAGACTGTGGATTACGTGAATCATATATTAGAAATGGACACAGTGCTACTGGGGTACAAGGGGTAACTGAGATGCAATTTCATTGTATTGCCTGTGATCATCCTTCAGAGATGTTTGGTTTTGTCAAGGAAGTGTTTCTAAATTTTGCAAAAGATTGGTCAGTTGAAGATGTTCGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAAGACATGAGAGGGAGGCAGCTGTTTGAGGTTGCCGATCAAATGCTGCTAAGGTTGTCAAATAAGTCTAACCTTCAAGAGGTCTATGGCCACATCATGTCTTTCCTAAATGATGGAGATTCTTCCAAATTAGCCTTGACACATAACTTTCCTGAGAAGGAACAAATTAAAGAAAAGAATGCAGTTGCTGAGCCCAGCCATGAAGCTGCCTGGATGAAATCTATCTATTCCGAAAAGACTCCTCTGTTAGAACGGCCGGCAAACATCCGTTCAAGCTATGCCCGGAATGATAAACGGGCTCTACCACAAGAGTTGCAGATGAATGTCCAAAAGGACTATGGTTTTGATGAATTGGAGAGTATAATAAAAATTAAACTGGCAGAGGCTAAAATGTTTCAAACACGCTCGGATGACGCCAGAAGAGAAGCTGAAGGCCTGAAACGCATTGCCCTTGCAAAGAATGAGAAGATTGAAGAGGAGTATGCAAGTCGACTCTCGAAGTTGCGATTGGCAGAGACTGAGGAAATGCGTAAACAAAAATTCGAAGAACACCAGGCATTGGAAAGAGCGCATCTGGAGTACTTTAACATGAAAATGAGAATGGAAGCAGACATTAAGGATCTGCTATTGAAAATGGAAGCGACCAAAAGGAGTCTTGCCATATGA 3588 0.4362 MKRLRSSEDLHSYGDKNGCKDSNLNRSSSSSHRTFYYKPDNVRKGLLSSSSSASRYDRDRTMDEDRDGSRLVRKRSDHDFDSFDRRKGFDRYRDTGDSRGYGAGGDRGLIQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRGSRVGLEDRVVRSPKNLRDVKSPTRSKDSESEHSKMRSSSRGSRDAKSKSKSPSWSKDSESEQSRSEQSKSAEVKKTEEVQVESRSSSEMEEGELEPEPMTETEQEKASNAAPKNEDQTSIPLDADEKEIQTESQLNDTDAIIHEIPDSLNKEESKPEEGTESAEQNVVKDDKMPDVQNDPTDKVRDTENGIETSVHNGNKAEGSRKVEIACKGETKEGAEQEKPLLHEEEHKQEKGVDLETRADSDQPEPHKEVSTDNEVLKTDGEITMETVTNNVRDRGKSVSVTPTNVVHPSEDVLWNDRGPRDLTTCYGDAMEGPKTRGFELFSRSPVRKAKKTDQSSLSKHKDESLSMEDLDLSLSLPNVLLPIGANENTPAPGSPSEARSVQSLSTFRTNSEGFTASMTFSGSQSFYHNPSCSLTQNSIDFEQSVHSRPLFQGIDQVSHGGWQGQYQTNPKQKEIPCCQGTLVNGSGTFCQSQAAWGVLEGQAVKGQPSRVLEGSSKMASGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDRSNGSLYRTASHKEHEQFQMVGLEFVETIIAKIVSEPVPAMAKKFHEMAGQTLSCLKESIREIMLNADKRGQILAFQKVLQNRSDITLEVLLKAHRVQLEILVALKTGLTNFIQLDNGISSTDLGEIFLNLRCRNLLCRSQLPVDECDCKVCAQKSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSATGVQGVTEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVEDVRKELEYVKRIFSASKDMRGRQLFEVADQMLLRLSNKSNLQEVYGHIMSFLNDGDSSKLALTHNFPEKEQIKEKNAVAEPSHEAAWMKSIYSEKTPLLERPANIRSSYARNDKRALPQELQMNVQKDYGFDELESIIKIKLAEAKMFQTRSDDARREAEGLKRIALAKNEKIEEEYASRLSKLRLAETEEMRKQKFEEHQALERAHLEYFNMKMRMEADIKDLLLKMEATKRSLAI 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1370 1195 MobiDBLite consensus disorder prediction 674 709 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 148 250 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 426 447 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 278 292 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 118 140 - -
Lele29g1370 1195 Coils Coil 1172 1192 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 56 97 - -
Lele29g1370 1195 Coils Coil 1144 1164 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 358 423 - -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 955 974 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1090 1110 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 795 810 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 810 825 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1129 1151 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 756 778 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 882 902 IPR004082 -
Lele29g1370 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 836 857 IPR004082 -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 303 349 - -
Lele29g1370 1195 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1192 IPR004082 -
Lele29g1370 1195 Coils Coil 1114 1134 - -
Lele29g1370 1195 CDD PHD_OBE1_like 875 934 - -
Lele29g1370 1195 Pfam Coiled-coil region of Oberon 1069 1183 IPR032535 -
Lele29g1370 1195 Pfam PHD - plant homeodomain finger protein 845 968 IPR032881 -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 1 16 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 18 36 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 487 510 - -
Lele29g1370 1195 MobiDBLite consensus disorder prediction 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1370 Lele-ChrLele29 20451084 20455606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1370 845 993 PHD Gene Family AT5G57380 30.719 1.13e-11 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1370 29 20451084 20455606 Lele31g0207 31 2027068 2031646 hybridization
Lele29g1370 29 20451084 20455606 Lele32g1204 32 13023774 13028429 hybridization