Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1361 ATGGTTGAACCTCGTCGTAAGCGGCCCAAAATTGCCAGAGGAGAAGATGATTATATGCCTGGAAGCATTATCGAGATTGAGCTACTTAAGTTTATGACCTTTGACTACTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGTTCTGGGAAGAGTTCTCTTGTGTGTGCCATTGCACTTGGCCTTGGGGGTGAGCCTCAGCTGCTCGGGCGAGCAACAAGTGTTGGATCATATGTGAAGCGGGGAGAAGAATCAGGTTGCATTAAGATTAGATTGAGAGGGGATAGTAAAGATGAGCATATCACTGTTATTCGGAAAATAAATACTAGCAACAAGTCTGAATGGTCGTTCAATGGAAGAGTAGTGCCCAAAAAGGATGTGATGGAAGCCATTCAACGGTTTAACATCCAAGTTAATAATTTGACTCAATTTCTACCCCAGGACAGGGTCTGTGAATTTGCTAAATTAACTCCTGTGCAACTTCTGGAAGAGACCGAAAAGGCTACTGGTGATCCCCAACTCCCAATCCTTCACCGAGGCCTTGTTGATAAAACCCGTGCATTGAGGCAAATTGAGTTGACAGTGAAGAAAAATGAAGAAACTTTGAAACAGCTAAAGGACCTTAATGCTGAACTTGAGAAGGATGTTGAACGTGTCCGTCAAAGGGATGAACTACTTAAAAAGGCTGAGTCCATGAAAAAGAAAGTACCGTGGCTTAGATATGATATGAAGAAGGCTGAATACTTTGAAGTTAAAGAACGTGAAAATTATGCTAAAATGAAGATGGAGGAAGCTGCAAATATATTAAATGATCTTAAAGACCCTATCGAGAAACAGAAAAAGAATAAGGCAGCAATGGATATGGAATATAAAAAAGTTGCCAGCCTTATAAATGGCAATGCCAAGAAGCGAATGGAACTTCTGGAGAAAGAAAACCATGTGGTTGTGGAATTACAAGGAAAATACAACGAAATAGAAGATTTGAGGAGGCAGGAAGAAACTCGTCGGCAAAGATTTTTAAAGGCTAAGGAGGAACTCGCTGCTGCTGAACGTGAACTGGAGAATCTGCCGCATTACGAACCTCCAAAGGAAGAGATTGAAAGACTTAAAGATGAAATTCTGAACTTGCAAAATTCTGCATCTCAAAAGAGGCTAGAGAAGTCAGAAACAGACAAACTTTTGTATCAGAAAAAGTCATCATTGTCACAGTGTATAGACAGGTTGAGAGAGATGGATAGTAAAAATACCAAGTGTTTGCACGCGTTACGTGAATCAGGGGCAGAGAGGGTAATGGAAGCTTATAAATGGGTGCAAGATAATCTCCATCTATTCAATAAGGAAGTGTATGGTCCTGTATTGCTGGAGGTTAATGTCTCAAAGCAGACTCATGCTGCCTTCCTGGAGGGTCATGTTCCTAATTACATCTGGAAGTCTTTCATTACTCAAGATTCTGGTGATCGGGATCTTTTGGTAAAAAATTTGACCTCCTTTGACGTTCCAGTATTAAATTATACTGGCGGCGATGGCAGTCAGAGAGAGCCTTTTCAAATTTCTGAAAATATGCGTACTCTTGGTATCTACTCCCGTCTTGATGAAGTTTTTGATGCTCCTACAGCTGTCAAGGAGGTTTTGATTGGACAGTTTGGTCTGGATCATGCTTATATTGGTACCAGAGAAACTGATCAGAAAGCAGATAGGGTCCAACAATTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGTTGGTCTAAATCTAGATATGGGAATCATGTGTCAGGAGTTGTTGAACAAGTACAACGCTCAAGACTTCTTTCTTACAATCTGGACGCTAGAGAAATCGAGAAGCTGAGGTCTCACAGAATGGACCTTGAAGAATCTATAGCAACCTTGGAAGCAACTTCTAGAAGGTTACAAGATGAGGAGAGACGCCTAAGCAATGAAGCAGCTAATCTTCGCAGACAGCGGGATGAAATAAACACTACTGTGCTTAAAGAGAAGGAAAAGCGCCGGGACATCATGCGCACTATTGAACTGAGGAAGAGGAGATTAGAATCAATGGCGGTAGAGGGTGATGTGGATATGGTTATTGCTAAGCTGACTGATGAAGCAAGAAATTGCAATATTCAGCGATTCCACAATGCAATCAAAATTAAGAACCTACTTCTTAAGGCAATTGGTTATAGACGGAGTTTTGCTGGAAAACATATGGCTATTCTTGACTTTGAGGCAAAGATTAGGGAGTTGGAGGCCAATTTGAAGCAGCATGAGAAGCTTGGTTTGCGAGCATCATTACACTTCGAAACCTGTAAGAAGGAGACTGAGAATTGTAGACAGCTGCTTTCAGAATGTTTGAGGCGTGCTGAATCAATCGCTCCCATCACTTCAGATCTTGAGAAGGAATTTCTTGAGATGCCCACTACTATTGAGGATTTGGAAGCTGCTATCCAAGACACCACTTCTCAAGCCAATTCTATACTTTTTGTCAATCATAATGTGTTGGAACAATATGAGAACCGTGAGCGTCAGATAGGAGCTTTAGCCACAAAACTTGAAGAAGATAAGAAGGAAGTAAGTAGGTGTCTAGCTGAAATAGATACCCTAAAGGGGACATGGCTTCCAACATTGAGGAACCTTGTGGCCCAGATAAACGAAACTTTCAGTCGTAATTTCCAAGATATGGCTGTTGCAGGAGAAGTTTCACTAGATGAGCGTGATGTGGACTTTGATCAGTTTGGGATACTCATAAAAGTGAAGTTCAGACCAACAGGACAGCTTCAAGTTCTGAGTGCCCACCATCAGTCTGGAGGGGAGCGATCAGTTTCTACTATTCTTTATCTTGTTTCTCTTCAAGATCTTACCAACTGCCCATTCAGAGTTGTTGATGAGATTAATCAAGGCATGGACCCAATAAATGAAAGAAAAATGTTCCAGCAACTAGTGAGAGCTGCCAGCCAGCCAAATACACCACAATGTTTCTTGCTTACCCCAAAGTTGTTACCAGATCTGGAATACAGTGAAGTGTGCAGTATATTAAATGTAATGAATGGGCCTTGGATTGAGAAAGTCTCAAAAGTTTGGGGTGAAGGTGATCGATGGGGGAAAATTGCAGAGTTGATGGTGGAAAATCAACGCTGA 3156 0.4141 MVEPRRKRPKIARGEDDYMPGSIIEIELLKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSVGSYVKRGEESGCIKIRLRGDSKDEHITVIRKINTSNKSEWSFNGRVVPKKDVMEAIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPILHRGLVDKTRALRQIELTVKKNEETLKQLKDLNAELEKDVERVRQRDELLKKAESMKKKVPWLRYDMKKAEYFEVKERENYAKMKMEEAANILNDLKDPIEKQKKNKAAMDMEYKKVASLINGNAKKRMELLEKENHVVVELQGKYNEIEDLRRQEETRRQRFLKAKEELAAAERELENLPHYEPPKEEIERLKDEILNLQNSASQKRLEKSETDKLLYQKKSSLSQCIDRLREMDSKNTKCLHALRESGAERVMEAYKWVQDNLHLFNKEVYGPVLLEVNVSKQTHAAFLEGHVPNYIWKSFITQDSGDRDLLVKNLTSFDVPVLNYTGGDGSQREPFQISENMRTLGIYSRLDEVFDAPTAVKEVLIGQFGLDHAYIGTRETDQKADRVQQLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYNLDAREIEKLRSHRMDLEESIATLEATSRRLQDEERRLSNEAANLRRQRDEINTTVLKEKEKRRDIMRTIELRKRRLESMAVEGDVDMVIAKLTDEARNCNIQRFHNAIKIKNLLLKAIGYRRSFAGKHMAILDFEAKIRELEANLKQHEKLGLRASLHFETCKKETENCRQLLSECLRRAESIAPITSDLEKEFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGALATKLEEDKKEVSRCLAEIDTLKGTWLPTLRNLVAQINETFSRNFQDMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEKVSKVWGEGDRWGKIAELMVENQR 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1361 1051 Coils Coil 193 234 - -
Lele29g1361 1051 Coils Coil 320 340 - -
Lele29g1361 1051 Gene3D - 22 227 IPR027417 -
Lele29g1361 1051 Gene3D - 849 1012 IPR027417 -
Lele29g1361 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 6 1044 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Lele29g1361 1051 FunFam Structural maintenance of chromosomes 5 847 1018 - -
Lele29g1361 1051 Coils Coil 840 863 - -
Lele29g1361 1051 CDD ABC_SMC5_euk 21 167 - -
Lele29g1361 1051 Pfam RecF/RecN/SMC N terminal domain 23 991 IPR003395 -
Lele29g1361 1051 Coils Coil 620 675 - -
Lele29g1361 1051 CDD ABC_SMC5_euk 924 1026 - -
Lele29g1361 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 994 IPR027417 -
Lele29g1361 1051 Coils Coil 371 391 - -
Lele29g1361 1051 Coils Coil 745 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1361 Lele-ChrLele29 20292678 20313142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1361 1 1042 Structural Maintenance of Chromosomes family AT5G15920 63.820 0.0 1354