Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1357 ATGTTCTTCATCAAACAAAGCCATCACCATCATCGTCTTCTTCATCTTCTTCTTCTTTCTCTTGTAATTATTCTTTCAGTTTCTTCTTTGGCCTCTGGTTTCCATGGAAACCAGCAAGCAAAAGCTCATGACAAGTTTCAGAAGCTAAAAAAGTACTTGAGATCAGGCCAAAATAATAAGAGGATCCTTTTTGAAGAAGCAGCTGAAGAGATTATTGATATTGAAGCTCATGTTCATAAAGATCAACAAAAAGGGTTGAAGGAGAAAGATAGAATCGAGAAGCTTCCAGGTCAACCTCTGGTTAGGTTTTCTCAATATGGAGGATATGTGACTGTGAATGAAGAAGCAGGACGTGCCTTTTATTATTATTTCACTGAAGCTTTTAAGAATAAGCAGAATTTGCCCCTCGTTCTCTGGCTTAATGGAGGGCCTGGATGTTCCTCTCTTGCCTATGGAGCCATGGAAGAACTTGGACCCTTCAGAGTCAACAGTGATGGCAAAACCCTTTTCAAAAACAGATATGCATGGAACTATGTTGCAAATATATTGTTCCTGGAGTCACCAGCTGGAGTGGGATTTTCATATTCAAACAGAACATCAGATTATGAAAACAGTGGAGACCAAAGAACAGCTAAAGATAACTACATCTTCTTGTTGAATTGGTTAGAGAGGTTTCCTGAATACAAGAACAGAGATTTCTACATTACTGGAGAAAGCTATGCTGGTCACTATGTTCCTCAACTTGCTCAAACTATTATCCAACATAACACTAAAGCCAACAAGACCATCATCAACCTCAAAGGAATCATGATAGGGAATGCAGCCATAAACGACGAGACAGATGAGAAGGGAATGTACGATTTCCTAGGAAGCCATGCGATAATGTCGGCTTCAACAACTTCAATAATCGACAAGTTCTGTAATTTCTCTGCAAATGCGGAAGATCAAACAAAAGAGTGCAATGAAGCTTTGGAGGAAGTAGACAGAGATTCTTACTATGTTGATATCTACAACATCTATGCTCCTATCTGCAGCCACCCTAATCTTACTGCCACCCCCAAGCCCACCTCTATTGTGTTGGACGAATGCAATGAATATTATATGATAGCATATTTGAATAGAGGGGAAGTTCAAGAGGCACTTCATGCGAATGTGACAAAACTCAAGTACGAGTGGACACCTTGCAGTGATGTGATACCAGAATGGCATGATAGCCCATCATCCACTCTTCCCCTCTTACGTCAAATCATGCACCATGGAATTAGGGTTTGGCTTTTCAGTGGAGACGTAGATGGAAGAGTGCCATTTACTGCAACACAATACGCTATGAACTCAATGAATATGAAAGTCAAAACTCCATGGCATCCTTGGTACTTCAATGGACAGGTTGCAGGGTACACACAAGTGTACAAGGGAGAGTTAACATTTGCAACAGTGAGGGACGCAGGGCATCAAGTGCCAAGCTACCAGGCAGCAAGATCTCTTTCTATGTTCAAACACTTCTTGGATGGCTCTTCTCTTCCTGATACTACTAGATATTAA 1542 0.4079 MFFIKQSHHHHRLLHLLLLSLVIILSVSSLASGFHGNQQAKAHDKFQKLKKYLRSGQNNKRILFEEAAEEIIDIEAHVHKDQQKGLKEKDRIEKLPGQPLVRFSQYGGYVTVNEEAGRAFYYYFTEAFKNKQNLPLVLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLFKNRYAWNYVANILFLESPAGVGFSYSNRTSDYENSGDQRTAKDNYIFLLNWLERFPEYKNRDFYITGESYAGHYVPQLAQTIIQHNTKANKTIINLKGIMIGNAAINDETDEKGMYDFLGSHAIMSASTTSIIDKFCNFSANAEDQTKECNEALEEVDRDSYYVDIYNIYAPICSHPNLTATPKPTSIVLDECNEYYMIAYLNRGEVQEALHANVTKLKYEWTPCSDVIPEWHDSPSSTLPLLRQIMHHGIRVWLFSGDVDGRVPFTATQYAMNSMNMKVKTPWHPWYFNGQVAGYTQVYKGELTFATVRDAGHQVPSYQAARSLSMFKHFLDGSSLPDTTRY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1357 513 Coils Coil 310 330 - -
Lele29g1357 513 FunFam Carboxypeptidase 86 346 - -
Lele29g1357 513 ProSitePatterns Serine carboxypeptidases, histidine active site. 474 491 IPR033124 GO:0004185
Lele29g1357 513 SUPERFAMILY alpha/beta-Hydrolases 95 507 IPR029058 -
Lele29g1357 513 Pfam Serine carboxypeptidase 97 504 IPR001563 GO:0004185|GO:0006508
Lele29g1357 513 FunFam Carboxypeptidase 409 504 - -
Lele29g1357 513 Gene3D - 363 399 - -
Lele29g1357 513 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 91 490 IPR001563 GO:0004185|GO:0006508
Lele29g1357 513 Gene3D - 409 504 - -
Lele29g1357 513 Gene3D alpha/beta hydrolase 86 346 IPR029058 -
Lele29g1357 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 184 IPR001563 GO:0004185|GO:0006508
Lele29g1357 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 195 IPR001563 GO:0004185|GO:0006508
Lele29g1357 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 221 246 IPR001563 GO:0004185|GO:0006508
Lele29g1357 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Lele29g1357 513 ProSitePatterns Serine carboxypeptidases, serine active site. 235 242 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1357 Lele-ChrLele29 20230695 20236245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1357 371 507 Calmodulin-binding Proteins AT2G22960 33.577 1.26e-18 82.0