Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1338 ATGGCTTTAGATTCTAAACAGAATCGTCCTTATGAAGTAGAAGTAGAAGAAGAAGATTCATACTGCCTTTCTGCCATGCTTCTGTGTTTTAGCCAGACCTACAGTGCAGCTCTTAAAGCTTCGCTTGACCTCAACTTATTTGAGATCATAGCTAAGGAAGGAGGACGGCACGTGTCAGCCTCTGAAATAGCTTCAAAGCTTCCGATTTCATCTCAACACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAACTGTTCATCTCGTGAGAAAGAAGATGGTGATGGCACTGAGATACTCTTTGGGATTTCTCCTGTGGGAAAATACTTTCTTAGCGATAATGGTGGATTATGTGATGTTGCCTCATTCAAGTGTCATCAAGCACTTGTTGATTGCTGGTTGAATTTTAAGGAAGCAATCATAGACGAAGACAGTGACTTGTTCAAGAAAATTCATGGAATGCCACTGTACCAATATGCAAAGACAGATCCAACGTTGAACAAAACATTCAACAAAGCCATGGCCAATGTTTGCAACATAGAGATGAGAAGGATTTTGGAAATATACAAAGGCTTTGAGGGAATATCAACACTTGTTGATGTTGGTGGAGGCACTGGTCAAAACCTTAAAATGATTGTCTCCAAGTATCCTTCAATTAAGGCTATTAATTTTGATTTGCCCCAAGTCATTCAAAATGCACCACCTCATCCAGGAATTGAGCATGTAGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATCATAATGAAGGTTGTATGTCACAATTGGTCGGATGAAAATAGCATAAAAGTATTGAAAAGATGCTATGAAGCATTGCCAGAGAAAGGGAAGGTGATAGTGGTGGAGCTGTTAATGCCTGAAATGATTGAAGCAACAAAAGAAGCCAAGTTAGTAACAAGCCTAGACAACACGATGTTTCTTCATGATGGAAGAGAAAGAACTGAGAAACAATTTGAATCTCTTTGTAAACGTTCTGGCTTTTCTCATTTCAAACTTGCTTCTCGAGCTTTATCTGTTTTTGGAGTCATGGAATTCTACAAATGA 1098 0.3925 MALDSKQNRPYEVEVEEEDSYCLSAMLLCFSQTYSAALKASLDLNLFEIIAKEGGRHVSASEIASKLPISSQHKDLAFRIDRLLRLLASHSLLNCSSREKEDGDGTEILFGISPVGKYFLSDNGGLCDVASFKCHQALVDCWLNFKEAIIDEDSDLFKKIHGMPLYQYAKTDPTLNKTFNKAMANVCNIEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIKAINFDLPQVIQNAPPHPGIEHVGGDMFESVPKGDAIIMKVVCHNWSDENSIKVLKRCYEALPEKGKVIVVELLMPEMIEATKEAKLVTSLDNTMFLHDGRERTEKQFESLCKRSGFSHFKLASRALSVFGVMEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1338 365 PIRSF O-mtase 3 365 IPR016461 GO:0008168
Lele29g1338 365 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983
Lele29g1338 365 Gene3D Vaccinia Virus protein VP39 121 365 IPR029063 -
Lele29g1338 365 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Lele29g1338 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 362 IPR029063 -
Lele29g1338 365 FunFam Caffeic acid 3-O-methyltransferase 4 119 - -
Lele29g1338 365 PANTHER O-METHYLTRANSFERASE 30 353 IPR016461 GO:0008168
Lele29g1338 365 SUPERFAMILY "Winged helix" DNA-binding domain 17 123 IPR036390 -
Lele29g1338 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 365 IPR016461 GO:0008168
Lele29g1338 365 FunFam Caffeic acid O-methyltransferase 121 365 - -
Lele29g1338 365 CDD AdoMet_MTases 206 299 - -
Lele29g1338 365 Gene3D - 3 119 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1338 Lele-ChrLele29 20012056 20013965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1338 7 357 Monolignol Biosynthesis Gene Families AT5G54160 49.577 1.25e-113 333