Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1337 ATGCTTCAGTGTTGTAGCCCCATCTACTGTGCAGTTCTTAAAGCTTCGCTTGAGCTGAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACACGTGTCAGCCTCTGAAATAGCTTCAAAGCTTCCACCTTCATCTCAACACAAAGATTTGGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAACTGTTCATTTCGTGAGAAAGAAGATGGTGTTGGCACTGAGAGACTCTATGCAATTTCTCCTATTGGCAAGTACTTTGTTGGTGGGGACGATGATGGTGGATACTTGACTCTCTTCCCATCATTCCTTTGTCATAAGACACTTATGGATGCTTGGATGAATTTTAAGGTTGCCATTATAGAGGAAGACAATAACTTATTCAAGAAAGTTCATGGAATGTCAATGTACCAATACCCAGAGAAAGATCCAACATGGAACAACATTTTCAACAAAGCAATGGCCAACCGTTGCAACCTAGATACGAGAAGAATATTGGAAATATACAAAGGATTTGAGGGATTATCAACACTTGTTGATGTTGGTGGCGGCATTGGCCAAAACCTCAAAATGATTGTCTCTAAGTATCCTTCAATTAAGGCTATTAATTTTGATTTGCCTAGTGTTATTCAAAATGCACCACCTCATCCAGGGATCGAGCATGAGGGAGGGGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATTATGTTGAAGGCCGTATGCCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAAGAAATGTTATGAATCATTACCAGAAAAAGGGAAGGTGATAGTGGTGGAGTTCATAATGCCTGAAGAAAATATGGAAAATGAAGAAACCAAGTTTGTAGCAAGCGTGGACAACCTCATGTTCATTCATGATGGAAGAGAAAGAATTGAGAAAGAATTTGAATATCTTTGCAAACGTTCTGGTTTCTCTGGTTTCAAAGTCGCTTGTCGTGCTTTCTCTGCTTTAGGAGTTATGGAATTCTACAAGTAA 1032 0.3973 MLQCCSPIYCAVLKASLELNLFEIIAKEGGRHVSASEIASKLPPSSQHKDLAFRIDRLLRLLASHSLLNCSFREKEDGVGTERLYAISPIGKYFVGGDDDGGYLTLFPSFLCHKTLMDAWMNFKVAIIEEDNNLFKKVHGMSMYQYPEKDPTWNNIFNKAMANRCNLDTRRILEIYKGFEGLSTLVDVGGGIGQNLKMIVSKYPSIKAINFDLPSVIQNAPPHPGIEHEGGDMFESVPKGDAIMLKAVCHNWSDENSIKVLKKCYESLPEKGKVIVVEFIMPEENMENEETKFVASVDNLMFIHDGRERIEKEFEYLCKRSGFSGFKVACRAFSALGVMEFYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1337 343 Pfam O-methyltransferase domain 120 324 IPR001077 GO:0008171
Lele29g1337 343 PIRSF O-mtase 3 343 IPR016461 GO:0008168
Lele29g1337 343 FunFam Caffeic acid 3-O-methyltransferase 1 94 - -
Lele29g1337 343 PANTHER O-METHYLTRANSFERASE 11 333 IPR016461 GO:0008168
Lele29g1337 343 Pfam Dimerisation domain 12 63 IPR012967 GO:0046983
Lele29g1337 343 Gene3D - 9 172 IPR036388 -
Lele29g1337 343 Gene3D Vaccinia Virus protein VP39 154 332 IPR029063 -
Lele29g1337 343 FunFam Caffeic acid O-methyltransferase 98 343 - -
Lele29g1337 343 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 343 IPR016461 GO:0008168
Lele29g1337 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 339 IPR029063 -
Lele29g1337 343 SUPERFAMILY "Winged helix" DNA-binding domain 4 99 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1337 Lele-ChrLele29 20000323 20003137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1337 13 343 Monolignol Biosynthesis Gene Families AT5G54160 52.096 2.06e-111 327